RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CPLX4Q7Z7G2 160 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 ALYREFQ86V81 257 aaKnown RBP8.78□□□□□ -1
CCDC93-208ENST00000474546 SMYD4Q8IYR2 804 aaPredicted RBP8.78□□□□□ -1
CCDC93-208ENST00000474546 MAB21L3Q8N8X9 362 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 USP38Q8NB14 1042 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 CCDC197Q8NCU1 140 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 KAT2BQ92831 832 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 ZKSCAN4Q969J2 545 aaPredicted RBP8.78□□□□□ -1
CCDC93-208ENST00000474546 TLR10Q9BXR5 811 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 TRIM6Q9C030 488 aaPredicted RBP8.78□□□□□ -1
CCDC93-208ENST00000474546 NT5C3AQ9H0P0 336 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 BLZF1Q9H2G9 400 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 CCDC134Q9H6E4 229 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
CCDC93-208ENST00000474546 FBXL5Q9UKA1 691 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 ATP6V0A2Q9Y487 856 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 ZNF804BA4D1E1 1349 aa8.78□□□□□ -1
CCDC93-208ENST00000474546 CACNA1GO43497 2377 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 FAM187AA6NFU0 413 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF233A6NK53 670 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 E7ENQ6 273 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 O00370 1275 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 PDE2AO00408 941 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 TRAF5O00463 557 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 ATP5HO75947 161 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 MYBL2P10244 700 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 IL6STP40189 918 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 USP11P51784 963 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 DRG2P55039 364 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 UBE4AQ14139 1066 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 ASTE1Q2TB18 679 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 TDRD12Q587J7 1177 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 MIIPQ5JXC2 388 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 SOGA3Q5TF21 947 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 FBXW10Q5XX13 1052 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 TYW1BQ6NUM6 668 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 LCORLQ8N3X6 602 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 C4orf32Q8N8J7 132 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 ZNF296Q8WUU4 475 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 RIN2Q8WYP3 895 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 MIEF2Q96C03 454 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 CHMP6Q96FZ7 201 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 PGM2Q96G03 612 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 FAM89AQ96GI7 184 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 RNPC3Q96LT9 517 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 PSMD1Q99460 953 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 DUSP9Q99956 384 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 GREM2Q9H772 168 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 MMRN2Q9H8L6 949 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 SLC40A1Q9NP59 571 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 SEC31BQ9NQW1 1179 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 AGPAT5Q9NUQ2 364 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 RNF216Q9NWF9 866 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 AIPL1Q9NZN9 384 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 TMEM59LQ9UK28 342 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 PLAAQ9Y263 795 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 GDAQ9Y2T3 454 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 RTCBQ9Y3I0 505 aaKnown RBP8.77□□□□□ -1.01
CCDC93-208ENST00000474546 ATAD5Q96QE3 1844 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 RPTORQ8N122 1335 aa8.77□□□□□ -1.01
CCDC93-208ENST00000474546 MYH1P12882 1939 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RNF225M0QZC1 329 aaPredicted RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 MGRN1O60291 552 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 MOCS3O95396 460 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 GGPS1O95749 300 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 A1BGP04217 495 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 NUDT17P0C025 328 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RFX1P22670 979 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 CDC25AP30304 524 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RFC4P35249 363 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SKIV2L2P42285 1042 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ADCY2Q08462 1091 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 IFT88Q13099 833 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 DHX34Q14147 1143 aaKnown RBP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 HLTFQ14527 1009 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC93-208ENST00000474546 GRM4Q14833 912 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 NPY5RQ15761 445 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 PTPN21Q16825 1174 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 EDRF1Q3B7T1 1238 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ANKRD20A8PQ5CZ79 823 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 C6orf118Q5T5N4 469 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 KLHDC7AQ5VTJ3 777 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 ANKRD40Q6AI12 368 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 RRAGAQ7L523 313 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 FUKQ8N0W3 1084 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 SYNE4Q8N205 404 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 STAG2Q8N3U4 1231 aa8.76□□□□□ -1.01
CCDC93-208ENST00000474546 TEX9Q8N6V9 391 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms