RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SNX8Q9Y5X2 465 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 NSD2O96028 1365 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CAPN14A8MX76 684 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 M0R3H8 397 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 WASLO00401 505 aaPredicted RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 CDK2AP1O14519 115 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CETN3O15182 167 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 MAPK13O15264 365 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 FRS3O43559 492 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SLITRK3O94933 977 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 BAG2O95816 211 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 HEXBP07686 556 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ATP2B4P23634 1241 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CSTF2P33240 577 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBR3-208ENST00000474426 TFAP4Q01664 338 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 KDSRQ06136 332 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 DDR1Q08345 913 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 NFE2L1Q14494 772 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 KCNB1Q14721 858 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 MFSD10Q14728 455 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 BCL2A1Q16548 175 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CCDC57Q2TAC2 916 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 NUTM2DQ5VT03 806 aaPredicted RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 POTEHQ6S545 545 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ADAMTS18Q8TE60 1221 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 COL26A1Q96A83 441 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TMIGD2Q96BF3 282 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TMEM237Q96Q45 408 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 EYA1Q99502 592 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 NUDT16L1Q9BRJ7 211 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 RIOK1Q9BRS2 568 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 APOL5Q9BWW9 433 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 FAM129AQ9BZQ8 928 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 CCSER1Q9C0I3 900 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 VPS11Q9H270 941 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 C8orf33Q9H7E9 229 aaPredicted RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 SCPEP1Q9HB40 452 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 PAIP2BQ9ULR5 123 aaKnown RBP3.82□□□□□ -1.8
UBR3-208ENST00000474426 TELO2Q9Y4R8 837 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 GMEB1Q9Y692 573 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 SLC4A7Q9Y6M7 1214 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 ROCK1Q13464 1354 aa3.82□□□□□ -1.8
UBR3-208ENST00000474426 TTC21BQ7Z4L5 1316 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SPDYE16A6NNV3 312 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 FAM177BA6PVY3 158 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 RSPH10B2B2RC85 870 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 TISP43B9A030 160 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 B9A039 149 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ICMTO60725 284 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HSPA4LO95757 839 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 RSPH10BP0C881 870 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 DDX5P17844 614 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 TARSP26639 723 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 LIFRP42702 1097 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 GUCY2FP51841 1108 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 COG7P83436 770 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 FOXK2Q01167 660 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 C17orf67Q0P5P2 114 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 C19orf57Q0VDD7 668 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 AADACL4Q5VUY2 407 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 OR7E24Q6IFN5 339 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 LHFPL2Q6ZUX7 228 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 FAM83AQ86UY5 434 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 CEP57Q86XR8 500 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 DDX11Q96FC9 970 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SLC47A1Q96FL8 570 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ZNF845Q96IR2 970 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 VPS45Q9NRW7 570 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 TOPORSQ9NS56 1045 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 GGA3Q9NZ52 723 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 MTRF1LQ9UGC7 380 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 TSR3Q9UJK0 312 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 TRIM33Q9UPN9 1127 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HAT1O14929 419 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SORBS3O60504 671 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 CYP11A1P05108 521 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ZKSCAN1P17029 563 aaPredicted RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPH1P31943 449 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 DAB2P98082 770 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 ROR2Q01974 943 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 HSPA14Q0VDF9 509 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 GFOD2Q3B7J2 385 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 TMEM259Q4ZIN3 620 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 WLSQ5T9L3 541 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SLC2A7Q6PXP3 512 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 TMC7Q7Z402 723 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 TRIM50Q86XT4 487 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 NKAIN4Q8IVV8 208 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBR3-208ENST00000474426 CHST13Q8NET6 341 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 CEP70Q8NHQ1 597 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 NOC3LQ8WTT2 800 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 HNRNPLLQ8WVV9 542 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 CLP1Q92989 425 aaKnown RBP3.81□□□□□ -1.8
UBR3-208ENST00000474426 GTF3C6Q969F1 213 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 PPP2R3CQ969Q6 453 aa3.81□□□□□ -1.8
UBR3-208ENST00000474426 SGK3Q96BR1 496 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms