RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
SYF2-203ENST00000474160 TELO2Q9Y4R8 837 aa21.42■■□□□ 1.02
SYF2-203ENST00000474160 PCDHA10Q9Y5I2 948 aa21.42■■□□□ 1.02
SYF2-203ENST00000474160 UMODL1Q5DID0 1318 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 TDP2O95551 362 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 CCL23P55773 120 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 PPFIA1Q13136 1202 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 SHHQ15465 462 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 LRCH2Q5VUJ6 765 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 FBXO18Q8NFZ0 1043 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 ZNF302Q9NR11 478 aa21.41■■□□□ 1.02
SYF2-203ENST00000474160 DDX39AO00148 427 aaKnown RBP21.4■■□□□ 1.02
SYF2-203ENST00000474160 BACH1O14867 736 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 PSMD10O75832 226 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 CKBP12277 381 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 EPHB4P54760 987 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 TRIM71Q2Q1W2 868 aaKnown RBP21.4■■□□□ 1.02
SYF2-203ENST00000474160 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 LRRC8DQ7L1W4 858 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 ETNPPLQ8TBG4 499 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 PPP1R13LQ8WUF5 828 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 LMBR1Q8WVP7 490 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
SYF2-203ENST00000474160 RNPC3Q96LT9 517 aaKnown RBP21.4■■□□□ 1.02
SYF2-203ENST00000474160 FOXP1Q9H334 677 aaPredicted RBP21.4■■□□□ 1.02
SYF2-203ENST00000474160 SETD4Q9NVD3 440 aa21.4■■□□□ 1.02
SYF2-203ENST00000474160 KAT6AQ92794 2004 aa21.39■■□□□ 1.02
SYF2-203ENST00000474160 TANC1Q9C0D5 1861 aa21.39■■□□□ 1.02
SYF2-203ENST00000474160 COL1A2P08123 1366 aa21.39■■□□□ 1.02
SYF2-203ENST00000474160 MBLAC1A4D2B0 266 aaPredicted RBP21.39■■□□□ 1.01
SYF2-203ENST00000474160 BTBD18B2RXH4 712 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 HBP1O60381 514 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 FGBP02675 491 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 NR5A1Q13285 461 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 GRIK4Q16099 956 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 C9orf50Q5SZB4 431 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 RASIP1Q5U651 963 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 HERVK_113Q902F9 699 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.39■■□□□ 1.015e-6■□□□□ 8.9
SYF2-203ENST00000474160 KCNMB3Q9NPA1 279 aa21.39■■□□□ 1.01
SYF2-203ENST00000474160 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.39■■□□□ 1.01
SYF2-203ENST00000474160 MAFBQ9Y5Q3 323 aaPredicted RBP21.39■■□□□ 1.01
SYF2-203ENST00000474160 POTEB3A0JP26 581 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 TREHO43280 583 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 CCNT1O60563 726 aaKnown RBP21.38■■□□□ 1.01
SYF2-203ENST00000474160 ACTN1P12814 892 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 MARK3P27448 753 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 ORC2Q13416 577 aaPredicted RBP21.38■■□□□ 1.01
SYF2-203ENST00000474160 HIC1Q14526 733 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 PLCB4Q15147 1175 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 PDXDC2PQ6P474 469 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 POTEBQ6S5H4 581 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 B3GNT9Q6UX72 402 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 C16orf59Q7L2K0 433 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 RSPH3Q86UC2 560 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 CCDC60Q8IWA6 550 aaPredicted RBP21.38■■□□□ 1.01
SYF2-203ENST00000474160 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 ATP8B4Q8TF62 1192 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 SCLYQ96I15 445 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 FAM167AQ96KS9 214 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 DISC1Q9NRI5 854 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 TUBE1Q9UJT0 475 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 TRPC6Q9Y210 931 aa21.38■■□□□ 1.01
SYF2-203ENST00000474160 IGSF9BQ9UPX0 1349 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 BAG4O95429 457 aaKnown RBP21.37■■□□□ 1.01
SYF2-203ENST00000474160 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
SYF2-203ENST00000474160 ZNF200P98182 395 aaPredicted RBP21.37■■□□□ 1.01
SYF2-203ENST00000474160 SWSAP1Q6NVH7 229 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 ZNF365Q70YC5 407 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 BBXQ8WY36 941 aaPredicted RBP21.37■■□□□ 1.01
SYF2-203ENST00000474160 PCDH10Q9P2E7 1040 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 CEP131Q9UPN4 1083 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 SAMM50Q9Y512 469 aa21.37■■□□□ 1.01
SYF2-203ENST00000474160 SLC37A4O43826 429 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 DTNBO60941 627 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 CXCL10P02778 98 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 INSRRP14616 1297 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 PPP2R5CQ13362 524 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 ZNF484Q5JVG2 852 aa21.36■■□□□ 1.01
SYF2-203ENST00000474160 TRIP12Q14669 1992 aaPredicted RBP21.36■■□□□ 1.01
SYF2-203ENST00000474160 RSPH10B2B2RC85 870 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 DKC1O60832 514 aaKnown RBP eCLIP21.35■■□□□ 1.01
SYF2-203ENST00000474160 EFCAB14O75071 495 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 BAIAP3O94812 1187 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 CD2BP2O95400 341 aaKnown RBP21.35■■□□□ 1.01
SYF2-203ENST00000474160 RSPH10BP0C881 870 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 ACRP10323 421 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 THPOP40225 353 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 TRAPPC10P48553 1259 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 EARS2Q5JPH6 523 aaKnown RBP21.35■■□□□ 1.01
SYF2-203ENST00000474160 FAM26DQ5JW98 314 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 FAM43BQ6ZT52 329 aaPredicted RBP21.35■■□□□ 1.01
SYF2-203ENST00000474160 UNC45AQ9H3U1 944 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 GABBR1Q9UBS5 961 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 PCDHA2Q9Y5H9 948 aa21.35■■□□□ 1.01
SYF2-203ENST00000474160 LAMA3Q16787 3333 aa21.34■■□□□ 1.01
SYF2-203ENST00000474160 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.34■■□□□ 1.01
SYF2-203ENST00000474160 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.34■■□□□ 1.01
SYF2-203ENST00000474160 MARCH6O60337 910 aa21.34■■□□□ 1.01
SYF2-203ENST00000474160 GNL2Q13823 731 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms