RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 AZI2Q9H6S1 392 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 PCDHA4Q9UN74 947 aa20.39■□□□□ 0.85
UPF3A-203ENST00000474056 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
UPF3A-203ENST00000474056 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
UPF3A-203ENST00000474056 LARGE1O95461 756 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 CIITAP33076 1130 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 ANKRD1Q15327 319 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 PRR16Q569H4 304 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 RUFY4Q6ZNE9 571 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 LENG9Q96B70 501 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 ZNF577Q9BSK1 485 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
UPF3A-203ENST00000474056 STK36Q9NRP7 1315 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 M0R2N6 131 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 CAND2O75155 1236 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 CDKL5O76039 1030 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 CTDNEP1O95476 244 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 KCNJ6P48051 423 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 STAT5BP51692 787 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 IGBP1P78318 339 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 PLCB4Q15147 1175 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 MARCH8Q5T0T0 291 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 ABHD15Q6UXT9 468 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 PLPPR4Q7Z2D5 763 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 BLIDQ8IZY5 108 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 DAGLBQ8NCG7 672 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 PHOSPHO2Q8TCD6 241 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 TBCKQ8TEA7 893 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 TUBE1Q9UJT0 475 aa20.37■□□□□ 0.85
UPF3A-203ENST00000474056 IGKV6D-21A0A0A0MT36 114 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 MBLAC1A4D2B0 266 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-203ENST00000474056 INSRRP14616 1297 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 FOSL2P15408 326 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 DEFB103AP81534 67 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 ME3Q16798 604 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 TMCO2Q7Z6W1 182 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-203ENST00000474056 CCDC60Q8IWA6 550 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-203ENST00000474056 DBF4BQ8NFT6 615 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 ZBTB10Q96DT7 871 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 SLC28A3Q9HAS3 691 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 KCNJ14Q9UNX9 436 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 TRPC6Q9Y210 931 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 EYSQ5T1H1 3165 aa20.36■□□□□ 0.85
UPF3A-203ENST00000474056 CHD9Q3L8U1 2897 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 NEK4P51957 841 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 C8orf34Q49A92 452 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 PLEKHG4Q58EX7 1191 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 PPP2R2DQ66LE6 453 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 TAF2Q6P1X5 1199 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 HERC6Q8IVU3 1022 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 NECAB1Q8N987 351 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 TRAPPC12Q8WVT3 735 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 PRDM12Q9H4Q4 367 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 TBC1D22BQ9NU19 505 aa20.35■□□□□ 0.85
UPF3A-203ENST00000474056 ABHD14A-ACY1A0A1B0GW23 586 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 BACH1O14867 736 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 CA3P07451 260 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 USP11P51784 963 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 IKBKEQ14164 716 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 FAM26DQ5JW98 314 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 FAM177A1Q8N128 213 aaPredicted RBP20.34■□□□□ 0.85
UPF3A-203ENST00000474056 GTF3C6Q969F1 213 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 PHF20Q9BVI0 1012 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 C22orf23Q9BZE7 217 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 ZNF302Q9NR11 478 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 GJB4Q9NTQ9 266 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 CHD7Q9P2D1 2997 aa20.34■□□□□ 0.85
UPF3A-203ENST00000474056 POTEB3A0JP26 581 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 RRN3P2A6NIE6 340 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 MSH4O15457 936 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 ARHGEF15O94989 841 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 CHRNA1P02708 482 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 MGAT3Q09327 533 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-203ENST00000474056 FAM160B1Q5W0V3 765 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 GALNT17Q6IS24 598 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 ZNF746Q6NUN9 644 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-203ENST00000474056 MIS18BP1Q6P0N0 1132 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 POTEBQ6S5H4 581 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 RPAINQ86UA6 219 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 MAFAQ8NHW3 353 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-203ENST00000474056 DNAJB3Q8WWF6 145 aa20.33■□□□□ 0.85
UPF3A-203ENST00000474056 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-203ENST00000474056 EFCAB14O75071 495 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 TDP2O95551 362 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 FDPSP14324 419 aaKnown RBP20.32■□□□□ 0.84
UPF3A-203ENST00000474056 SLC26A2P50443 739 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 KRT76Q01546 638 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 SWSAP1Q6NVH7 229 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.32■□□□□ 0.84
UPF3A-203ENST00000474056 SLC17A8Q8NDX2 589 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 GJA10Q969M2 543 aa20.32■□□□□ 0.84
UPF3A-203ENST00000474056 COL4A4P53420 1690 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-203ENST00000474056 KIF28PB7ZC32 967 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 TLL1O43897 1013 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 ATP4AP20648 1035 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 NONOQ15233 471 aaKnown RBP eCLIP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 INF2Q27J81 1249 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 PDXDC2PQ6P474 469 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms