RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 KIF11P52732 1056 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 JAM2P57087 298 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 RTP1P59025 263 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ERVK-21P61565 698 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 MLC1Q15049 377 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 GORABQ5T7V8 394 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ANGEL2Q5VTE6 544 aaKnown RBP5.53□□□□□ -1.52
BRCA1-212ENST00000473961 OSTM1Q86WC4 334 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 TEX2Q8IWB9 1127 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 OXR1Q8N573 874 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ZNF610Q8N9Z0 462 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 CLRN3Q8NCR9 226 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 PHOSPHO1Q8TCT1 267 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 JPH3Q8WXH2 748 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-212ENST00000473961 SSH1Q8WYL5 1049 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 FUBP3Q96I24 572 aaKnown RBP eCLIP5.53□□□□□ -1.52
BRCA1-212ENST00000473961 CDIP1Q9H305 208 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 TCF7L1Q9HCS4 588 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 USP36Q9P275 1121 aaKnown RBP5.53□□□□□ -1.52
BRCA1-212ENST00000473961 GULP1Q9UBP9 304 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 PNMA8BQ9ULN7 279 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-212ENST00000473961 SRPK3Q9UPE1 567 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ZNF281Q9Y2X9 895 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 TNKSO95271 1327 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 CLASP2O75122 1294 aaKnown RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 MAP4K4O95819 1239 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 FPR2P25090 351 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 LRRC32Q14392 662 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 TERF2Q15554 542 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 MINDY4Q4G0A6 757 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 PGM2L1Q6PCE3 622 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 ZPBP2Q6X784 338 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 CEP128Q6ZU80 1094 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 FRMD7Q6ZUT3 714 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 SLCO6A1Q86UG4 719 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 NLRP10Q86W26 655 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 PTRH1Q86Y79 214 aaKnown RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 DCP2Q8IU60 420 aaKnown RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 MAGEB6Q8N7X4 407 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 DPF3Q92784 378 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 ACAP3Q96P50 834 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 NUP88Q99567 741 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-212ENST00000473961 AP5M1Q9H0R1 490 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 PRDM11Q9NQV5 511 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 KCNH7Q9NS40 1196 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 C14orf119Q9NWQ9 140 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 IP6K2Q9UHH9 426 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 FBXL7Q9UJT9 491 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 U3KQE9 123 aa5.52□□□□□ -1.53
BRCA1-212ENST00000473961 NPIPB6E9PJ23 425 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 SCDO00767 359 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 TPD52L2O43399 206 aaKnown RBP5.51□□□□□ -1.53
BRCA1-212ENST00000473961 MT-CO1P00395 513 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 CYP2C19P33261 490 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 ARL4AP40617 200 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 SLC6A11P48066 632 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 FNTBP49356 437 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 ADCY1Q08828 1119 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 LRRC41Q15345 812 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 HABP4Q5JVS0 413 aaKnown RBP5.51□□□□□ -1.53
BRCA1-212ENST00000473961 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 PPP4R4Q6NUP7 873 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 CC2D1AQ6P1N0 951 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-212ENST00000473961 PRR23BQ6ZRT6 265 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 C1orf162Q8NEQ5 155 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-212ENST00000473961 MORC4Q8TE76 937 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.53
BRCA1-212ENST00000473961 LINC01599Q8WXQ3 324 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 E2F7Q96AV8 911 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 HHIPL1Q96JK4 782 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 ALPK1Q96QP1 1244 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 SP110Q9HB58 689 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 PDLIM7Q9NR12 457 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 SLC52A1Q9NWF4 448 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 TMEM59LQ9UK28 342 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 RCAN3Q9UKA8 241 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 NUDT5Q9UKK9 219 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 INVSQ9Y283 1065 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 RWDD3Q9Y3V2 267 aa5.51□□□□□ -1.53
BRCA1-212ENST00000473961 FITM1A5D6W6 292 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 TRIM75PA6NK02 468 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 NFIBO00712 420 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 HGSO14964 777 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 KDM1AO60341 852 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 PEX14O75381 377 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 ZBTB48P10074 688 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 RBP3P10745 1247 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 COL6A2P12110 1019 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 SLC9A1P19634 815 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms