RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TGFB3P10600 412 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 PDHBP11177 359 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 UBA1P22314 1058 aaKnown RBP12.3□□□□□ -0.44
SSBP1-209ENST00000473783 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 TAF2Q6P1X5 1199 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 TSHZ1Q6ZSZ6 1077 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 FTHL17Q9BXU8 183 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 AAASQ9NRG9 546 aa12.3□□□□□ -0.44
SSBP1-209ENST00000473783 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 M0R2C6 588 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
SSBP1-209ENST00000473783 FGF18O76093 207 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 MTHFRP42898 656 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 ERVFC1P60507 584 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 MGAT3Q09327 533 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 FBXO47Q5MNV8 452 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 LINC01599Q8WXQ3 324 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 TMEM47Q9BQJ4 181 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 ADAM7Q9H2U9 754 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 MLXIPQ9HAP2 919 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 LZTS1Q9Y250 596 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
SSBP1-209ENST00000473783 SORBS3O60504 671 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 HSPD1P10809 573 aaKnown RBP12.28□□□□□ -0.44
SSBP1-209ENST00000473783 ATXN1P54253 815 aaKnown RBP12.28□□□□□ -0.44
SSBP1-209ENST00000473783 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 GPR161Q8N6U8 529 aaKnown RBP12.28□□□□□ -0.44
SSBP1-209ENST00000473783 CASP10Q92851 521 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 TMEM260Q9NX78 707 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 LIMD1Q9UGP4 676 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 CDH22Q9UJ99 828 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 ZNF215Q9UL58 517 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-209ENST00000473783 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
SSBP1-209ENST00000473783 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
SSBP1-209ENST00000473783 NOP56O00567 594 aaKnown RBP12.27□□□□□ -0.45
SSBP1-209ENST00000473783 ORC4O43929 436 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 HMMRO75330 724 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 ADRB1P08588 477 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 ARP10275 920 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 RLBP1P12271 317 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 SCG2P13521 617 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 SP2Q02086 613 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
SSBP1-209ENST00000473783 PLPP4Q5VZY2 271 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 PDCD2LQ9BRP1 358 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 NGRNQ9NPE2 291 aaKnown RBP12.27□□□□□ -0.45
SSBP1-209ENST00000473783 FBXL21Q9UKT6 434 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 DUSP12Q9UNI6 340 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 SQORQ9Y6N5 450 aa12.27□□□□□ -0.45
SSBP1-209ENST00000473783 RPLP2P05387 115 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 CD52P31358 61 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 CTDSPL2Q05D32 466 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 TDGQ13569 410 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 ACAP1Q15027 740 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 SPOUT1Q5T280 376 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 RTN4RL1Q86UN2 441 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 SIX5Q8N196 739 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 TCF25Q9BQ70 676 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 AGO3Q9H9G7 860 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 CYP26B1Q9NR63 512 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
SSBP1-209ENST00000473783 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 MRPL11Q9Y3B7 192 aaKnown RBP12.26□□□□□ -0.45
SSBP1-209ENST00000473783 PRR5-ARHGAP8B1AHC4 643 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 GATMP50440 423 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 ARHGAP8P85298 464 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 GHRHRQ02643 423 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 KIAA1841Q6NSI8 718 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 RUFY4Q6ZNE9 571 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 VSIG10LQ86VR7 867 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 COLGALT1Q8NBJ5 622 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-209ENST00000473783 MRPS27Q92552 414 aaKnown RBP12.25□□□□□ -0.45
SSBP1-209ENST00000473783 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 CHAMP1Q96JM3 812 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 RTKNQ9BST9 563 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 ENTPD7Q9NQZ7 604 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
SSBP1-209ENST00000473783 HCFC2Q9Y5Z7 792 aa12.25□□□□□ -0.45
SSBP1-209ENST00000473783 CDY2AQ9Y6F7 541 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms