RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-217ENST00000473720 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 KCNH7Q9NS40 1196 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
SMPD4-217ENST00000473720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-217ENST00000473720 MAFGO15525 162 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
SMPD4-217ENST00000473720 POU3F3P20264 500 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-217ENST00000473720 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-217ENST00000473720 ERVK-21P61565 698 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 FUT2Q10981 343 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 AAK1Q2M2I8 961 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 BLOC1S2Q6QNY1 142 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 RSPH3Q86UC2 560 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 BRF1Q92994 677 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-217ENST00000473720 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 CDY2AQ9Y6F7 541 aa13.64□□□□□ -0.23
SMPD4-217ENST00000473720 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-217ENST00000473720 INSRRP14616 1297 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 ACTR2P61160 394 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
SMPD4-217ENST00000473720 APBB2Q92870 758 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 HLA-CQ95604 372 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 PCYT2Q99447 389 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
SMPD4-217ENST00000473720 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
SMPD4-217ENST00000473720 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 BACH1O14867 736 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 CSPG5O95196 566 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 BMP1P13497 986 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 SCG2P13521 617 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 STAT5BP51692 787 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-217ENST00000473720 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-217ENST00000473720 FAM26DQ5JW98 314 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 MARCH8Q5T0T0 291 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 PLA2G4DQ86XP0 818 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-217ENST00000473720 PHKBQ93100 1093 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
SMPD4-217ENST00000473720 COG5Q9UP83 839 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 NFASCO94856 1347 aa13.62□□□□□ -0.23
SMPD4-217ENST00000473720 XIRP2A4UGR9 3374 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 RRN3P2A6NIE6 340 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 M0QZ92 97 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 ADAMTS3O15072 1205 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 HSPA4P34932 840 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 SREBF1P36956 1147 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
SMPD4-217ENST00000473720 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
SMPD4-217ENST00000473720 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
SMPD4-217ENST00000473720 MGAT3Q09327 533 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-217ENST00000473720 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 LPIN1Q14693 890 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-217ENST00000473720 EPC2Q52LR7 807 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
SMPD4-217ENST00000473720 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 MBLAC1A4D2B0 266 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-217ENST00000473720 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 CD52P31358 61 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 MRPS6P82932 125 aaKnown RBP13.6□□□□□ -0.23
SMPD4-217ENST00000473720 GPM6BQ13491 265 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 TCEAL9Q9UHQ7 104 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 NCOR1O75376 2440 aa13.6□□□□□ -0.23
SMPD4-217ENST00000473720 FAM86B1E9PN63 330 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 MEIS1O00470 390 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 ENPP3O14638 875 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 REC8O95072 547 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 FAM86B2P0C5J1 330 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 CTNNB1P35222 781 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 IER5Q5VY09 327 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 FIBCD1Q8N539 461 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms