RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
CPNE1-222ENST00000473373 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 SLC28A3Q9HAS3 691 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 BRMS1Q9HCU9 246 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 EMSYQ7Z589 1322 aa13.08□□□□□ -0.32
CPNE1-222ENST00000473373 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 M0QZ92 97 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 MEIS1O00470 390 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 PFKFB2O60825 505 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 COL9A1P20849 921 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 STAT5BP51692 787 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 FOSBP53539 338 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 GRIK4Q16099 956 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 CNKSR3Q6P9H4 555 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
CPNE1-222ENST00000473373 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-222ENST00000473373 PBX4Q9BYU1 374 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-222ENST00000473373 TUBE1Q9UJT0 475 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 TELO2Q9Y4R8 837 aa13.07□□□□□ -0.32
CPNE1-222ENST00000473373 GAS7O60861 476 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 BAIAP3O94812 1187 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 CYP3A4P08684 503 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 RABGGTBP53611 331 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 IKBKEQ14164 716 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPNE1-222ENST00000473373 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-222ENST00000473373 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 PDXDC2PQ6P474 469 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 PRDM12Q9H4Q4 367 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 KCNJ14Q9UNX9 436 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 SIP14410 1827 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 CDH23Q9H251 3354 aa13.06□□□□□ -0.32
CPNE1-222ENST00000473373 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 RRN3P2A6NIE6 340 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 CHMP2AO43633 222 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 DTNBO60941 627 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 EFCAB14O75071 495 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 SEC24BO95487 1268 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 PSAPP07602 524 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 KRT76Q01546 638 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-222ENST00000473373 TAF2Q6P1X5 1199 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 KRT25Q7Z3Z0 450 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 WNT8BQ93098 351 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-222ENST00000473373 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
CPNE1-222ENST00000473373 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 TLL1O43897 1013 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 NBNO60934 754 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 CAND2O75155 1236 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 LGR5O75473 907 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 INSRRP14616 1297 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 USP11P51784 963 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 RBL2Q08999 1139 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 HIC1Q14526 733 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 INF2Q27J81 1249 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 FAM117BQ6P1L5 589 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-222ENST00000473373 DNAJB3Q8WWF6 145 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 SEPT8Q92599 483 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 GTF3C6Q969F1 213 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
CPNE1-222ENST00000473373 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 ABHD14A-ACY1A0A1B0GW23 586 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 WDR64B1ANS9 1081 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 HBP1O60381 514 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 AMHP03971 560 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 IGFBP4P22692 258 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 KRT2P35908 639 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 SLC26A2P50443 739 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 PLCB4Q15147 1175 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 ME3Q16798 604 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms