RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 FOSP01100 380 aaPredicted RBP19.03■□□□□ 0.64
USP40-212ENST00000473191 GNAT1P11488 350 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 INSRRP14616 1297 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 PDIA3P30101 505 aaKnown RBP19.03■□□□□ 0.64
USP40-212ENST00000473191 AP3B2Q13367 1082 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 FAM26DQ5JW98 314 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 ZNF713Q8N859 430 aaPredicted RBP19.03■□□□□ 0.64
USP40-212ENST00000473191 GDPD5Q8WTR4 605 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 RAD9AQ99638 391 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 ZMYND12Q9H0C1 365 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 SMARCAD1Q9H4L7 1026 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 EHMT1Q9H9B1 1298 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
USP40-212ENST00000473191 NFASCO94856 1347 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 MBLAC1A4D2B0 266 aaPredicted RBP19.02■□□□□ 0.64
USP40-212ENST00000473191 REC8O95072 547 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 GHRP10912 638 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 TFF2Q03403 129 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 PLCB4Q15147 1175 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 RUFY3Q7L099 469 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 C17orf80Q9BSJ5 609 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 SLC26A6Q9BXS9 759 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 UPF3BQ9BZI7 483 aaKnown RBP19.02■□□□□ 0.64
USP40-212ENST00000473191 SUGCTQ9HAC7 445 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 THEGQ9P2T0 379 aa19.02■□□□□ 0.64
USP40-212ENST00000473191 KAT6AQ92794 2004 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 DHX15O43143 795 aaKnown RBP19.01■□□□□ 0.63
USP40-212ENST00000473191 CAND2O75155 1236 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 UPP2O95045 317 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 POU3F3P20264 500 aaPredicted RBP19.01■□□□□ 0.63
USP40-212ENST00000473191 ZNF76P36508 570 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 TJAP1Q5JTD0 557 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 SEPT8Q92599 483 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 SDF4Q9BRK5 362 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 ZSWIM6Q9HCJ5 1215 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 VPS54Q9P1Q0 977 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 TRANK1O15050 2925 aa19.01■□□□□ 0.63
USP40-212ENST00000473191 PRRC2BQ5JSZ5 2229 aaKnown RBP19■□□□□ 0.63
USP40-212ENST00000473191 MUC3AQ02505 3323 aa19■□□□□ 0.63
USP40-212ENST00000473191 CCDC196A0A1B0GTZ2 297 aa19■□□□□ 0.63
USP40-212ENST00000473191 ESYT2A0FGR8 921 aa19■□□□□ 0.63
USP40-212ENST00000473191 EFCAB14O75071 495 aa19■□□□□ 0.63
USP40-212ENST00000473191 ATG7O95352 703 aa19■□□□□ 0.63
USP40-212ENST00000473191 AMHP03971 560 aa19■□□□□ 0.63
USP40-212ENST00000473191 EVCP57679 992 aa19■□□□□ 0.63
USP40-212ENST00000473191 HTRA4P83105 476 aaPredicted RBP19■□□□□ 0.63
USP40-212ENST00000473191 TMEM62Q0P6H9 643 aa19■□□□□ 0.63
USP40-212ENST00000473191 LPIN1Q14693 890 aa19■□□□□ 0.63
USP40-212ENST00000473191 RPAINQ86UA6 219 aa19■□□□□ 0.63
USP40-212ENST00000473191 PLA2G4DQ86XP0 818 aa19■□□□□ 0.63
USP40-212ENST00000473191 ASB2Q96Q27 587 aa19■□□□□ 0.63
USP40-212ENST00000473191 IFIH1Q9BYX4 1025 aaKnown RBP19■□□□□ 0.63
USP40-212ENST00000473191 FAM49AQ9H0Q0 323 aaPredicted RBP19■□□□□ 0.63
USP40-212ENST00000473191 CDY2AQ9Y6F7 541 aa19■□□□□ 0.63
USP40-212ENST00000473191 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 CYP3A4P08684 503 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 PSMA5P28066 241 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 STAT5BP51692 787 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 ERVK-21P61565 698 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 ABHD15Q6UXT9 468 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 CCDC60Q8IWA6 550 aaPredicted RBP18.99■□□□□ 0.63
USP40-212ENST00000473191 TOP1MTQ969P6 601 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 AGO3Q9H9G7 860 aaKnown RBP18.99■□□□□ 0.63
USP40-212ENST00000473191 TRPC6Q9Y210 931 aa18.99■□□□□ 0.63
USP40-212ENST00000473191 IFNAR1P17181 557 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 ATP4AP20648 1035 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 STK3Q13188 491 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 SKIV2LQ15477 1246 aaKnown RBP18.98■□□□□ 0.63
USP40-212ENST00000473191 TAF2Q6P1X5 1199 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 REXO1Q8N1G1 1221 aaKnown RBP18.98■□□□□ 0.63
USP40-212ENST00000473191 ATXN2LQ8WWM7 1075 aaKnown RBP18.98■□□□□ 0.63
USP40-212ENST00000473191 GJA10Q969M2 543 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 AIFM3Q96NN9 605 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 TGS1Q96RS0 853 aaKnown RBP18.98■□□□□ 0.63
USP40-212ENST00000473191 RNF26Q9BY78 433 aaPredicted RBP18.98■□□□□ 0.63
USP40-212ENST00000473191 AZI2Q9H6S1 392 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 C6orf50Q9HD87 102 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 INSL6Q9Y581 213 aa18.98■□□□□ 0.63
USP40-212ENST00000473191 IPO5O00410 1097 aaKnown RBP18.97■□□□□ 0.63
USP40-212ENST00000473191 GTPBP6O43824 516 aaPredicted RBP18.97■□□□□ 0.63
USP40-212ENST00000473191 KCNQ1P51787 676 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 FBXO47Q5MNV8 452 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 NIPA1Q7RTP0 329 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 PLPPR4Q7Z2D5 763 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 TRMT1LQ7Z2T5 733 aaKnown RBP18.97■□□□□ 0.63
USP40-212ENST00000473191 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
USP40-212ENST00000473191 LINC01599Q8WXQ3 324 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 LENG9Q96B70 501 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 NECAB3Q96P71 396 aaPredicted RBP18.97■□□□□ 0.63
USP40-212ENST00000473191 GLT8D2Q9H1C3 349 aa18.97■□□□□ 0.63
USP40-212ENST00000473191 LOXHD1Q8IVV2 1947 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 COL4A6Q14031 1691 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 POTEB3A0JP26 581 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 MRPS6P82932 125 aaKnown RBP18.96■□□□□ 0.63
USP40-212ENST00000473191 PRR16Q569H4 304 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 SWSAP1Q6NVH7 229 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 POTEBQ6S5H4 581 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 ZNF577Q9BSK1 485 aa18.96■□□□□ 0.63
USP40-212ENST00000473191 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms