RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SEPT8Q92599 483 aa23.64■■□□□ 1.37
EPHB3-202ENST00000473079 SLC26A6Q9BXS9 759 aa23.64■■□□□ 1.37
EPHB3-202ENST00000473079 NCOA5Q9HCD5 579 aaKnown RBP23.64■■□□□ 1.37
EPHB3-202ENST00000473079 IGKV6D-21A0A0A0MT36 114 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 DHX15O43143 795 aaKnown RBP23.63■■□□□ 1.37
EPHB3-202ENST00000473079 RPLP2P05387 115 aaKnown RBP23.63■■□□□ 1.37
EPHB3-202ENST00000473079 CTSHP09668 335 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 IGFBP4P22692 258 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 MARK3P27448 753 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 SLC26A2P50443 739 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 RSPH3Q86UC2 560 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 TUBE1Q9UJT0 475 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 PRUNE2Q8WUY3 3088 aa23.63■■□□□ 1.37
EPHB3-202ENST00000473079 ARHGEF15O94989 841 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 CHRNA1P02708 482 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 AMHP03971 560 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 INSRRP14616 1297 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 CIITAP33076 1130 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 STAT5BP51692 787 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 ABHD15Q6UXT9 468 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.62■■□□□ 1.37
EPHB3-202ENST00000473079 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 TMCO2Q7Z6W1 182 aaPredicted RBP23.62■■□□□ 1.37
EPHB3-202ENST00000473079 TRIM22Q8IYM9 498 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 APBB2Q92870 758 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 OSBPL7Q9BZF2 842 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 TBC1D22BQ9NU19 505 aa23.62■■□□□ 1.37
EPHB3-202ENST00000473079 IPO5O00410 1097 aaKnown RBP23.61■■□□□ 1.37
EPHB3-202ENST00000473079 CCNE2O96020 404 aa23.61■■□□□ 1.37
EPHB3-202ENST00000473079 SETQ01105 290 aaPredicted RBP23.61■■□□□ 1.37
EPHB3-202ENST00000473079 PLCB4Q15147 1175 aa23.61■■□□□ 1.37
EPHB3-202ENST00000473079 FAM177A1Q8N128 213 aaPredicted RBP23.61■■□□□ 1.37
EPHB3-202ENST00000473079 UPF3BQ9BZI7 483 aaKnown RBP23.61■■□□□ 1.37
EPHB3-202ENST00000473079 PDRG1Q9NUG6 133 aa23.61■■□□□ 1.37
EPHB3-202ENST00000473079 PTPRSQ13332 1948 aa23.61■■□□□ 1.37
EPHB3-202ENST00000473079 LCHNA4D1U4 455 aa23.6■■□□□ 1.37
EPHB3-202ENST00000473079 SSRP1Q08945 709 aaKnown RBP23.6■■□□□ 1.37
EPHB3-202ENST00000473079 MGAT3Q09327 533 aa23.6■■□□□ 1.37
EPHB3-202ENST00000473079 VPS54Q9P1Q0 977 aa23.6■■□□□ 1.37
EPHB3-202ENST00000473079 INSL6Q9Y581 213 aa23.6■■□□□ 1.37
EPHB3-202ENST00000473079 TRANK1O15050 2925 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 PPFIA3O75145 1194 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 DEXIO95424 95 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 ANAPC15P60006 121 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 HTRA4P83105 476 aaPredicted RBP23.59■■□□□ 1.37
EPHB3-202ENST00000473079 ZNF577Q9BSK1 485 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 COL25A1Q9BXS0 654 aaPredicted RBP23.59■■□□□ 1.37
EPHB3-202ENST00000473079 IFIH1Q9BYX4 1025 aaKnown RBP23.59■■□□□ 1.37
EPHB3-202ENST00000473079 CERS4Q9HA82 394 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 TRPC6Q9Y210 931 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 PCDHA2Q9Y5H9 948 aa23.59■■□□□ 1.37
EPHB3-202ENST00000473079 EPOPA6NHQ4 379 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 RFXAPO00287 272 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 CPLX1O14810 134 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 USP11P51784 963 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 IGBP1P78318 339 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 FAM160B1Q5W0V3 765 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 CPLX2Q6PUV4 134 aaKnown RBP23.58■■□□□ 1.37
EPHB3-202ENST00000473079 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 DNAJB3Q8WWF6 145 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 PPM1EQ8WY54 764 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 ARNTL2Q8WYA1 636 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 TOP1MTQ969P6 601 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 MTCH2Q9Y6C9 303 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 SQORQ9Y6N5 450 aa23.58■■□□□ 1.37
EPHB3-202ENST00000473079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.57■■□□□ 1.36
EPHB3-202ENST00000473079 POTEB3A0JP26 581 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 NLRP5P59047 1200 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 ERVK-21P61565 698 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 ZNF746Q6NUN9 644 aaPredicted RBP23.57■■□□□ 1.36
EPHB3-202ENST00000473079 POTEBQ6S5H4 581 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 MYOCDQ8IZQ8 938 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 SP7Q8TDD2 431 aaPredicted RBP23.57■■□□□ 1.36
EPHB3-202ENST00000473079 LENG9Q96B70 501 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 LARP6Q9BRS8 491 aaKnown RBP23.57■■□□□ 1.36
EPHB3-202ENST00000473079 C22orf23Q9BZE7 217 aa23.57■■□□□ 1.36
EPHB3-202ENST00000473079 LINC01553A4QN01 128 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 RBAK-RBAKDNI3L0D1 243 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 DDX39AO00148 427 aaKnown RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 GTPBP6O43824 516 aaPredicted RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 EDIL3O43854 480 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 HBP1O60381 514 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 MRPS6P82932 125 aaKnown RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 LPIN1Q14693 890 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 CCDC85BQ15834 202 aaPredicted RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 PRR16Q569H4 304 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 IER5Q5VY09 327 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 MIS18BP1Q6P0N0 1132 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 SMAP1Q8IYB5 467 aaPredicted RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 NME8Q8N427 588 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 ATP8B4Q8TF62 1192 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 ATXN2LQ8WWM7 1075 aaKnown RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 TGS1Q96RS0 853 aaKnown RBP23.56■■□□□ 1.36
EPHB3-202ENST00000473079 PCDHA4Q9UN74 947 aa23.56■■□□□ 1.36
EPHB3-202ENST00000473079 SMIM35A0A1B0GVV1 85 aa23.55■■□□□ 1.36
EPHB3-202ENST00000473079 BACH1O14867 736 aa23.55■■□□□ 1.36
EPHB3-202ENST00000473079 KRT76Q01546 638 aa23.55■■□□□ 1.36
EPHB3-202ENST00000473079 FBXO47Q5MNV8 452 aa23.55■■□□□ 1.36
EPHB3-202ENST00000473079 GALNT17Q6IS24 598 aa23.55■■□□□ 1.36
EPHB3-202ENST00000473079 FAM117BQ6P1L5 589 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms