RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ERGIC2Q96RQ1 377 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 DNAJC7Q99615 494 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 DUSP9Q99956 384 aaKnown RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 HAUS4Q9H6D7 363 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 TDRD3Q9H7E2 651 aaKnown RBP8.47□□□□□ -1.05
CCDC171-205ENST00000472806 KCNMB3Q9NPA1 279 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 RABGAP1Q9Y3P9 1069 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 PITPNM2Q9BZ72 1349 aa8.47□□□□□ -1.05
CCDC171-205ENST00000472806 ADAMTSL1Q8N6G6 1762 aa8.46□□□□□ -1.05
CCDC171-205ENST00000472806 SIPA1L1O43166 1804 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 SLX4Q8IY92 1834 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 ARFGEF1Q9Y6D6 1849 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 CTAGE9A4FU28 777 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 PIK3CDO00329 1044 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 PLA2G6O60733 806 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 GH2P01242 217 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 KRT18P05783 430 aaKnown RBP8.46□□□□□ -1.06
CCDC171-205ENST00000472806 TUBBP07437 444 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 CYP3A4P08684 503 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 VIL1P09327 827 aaKnown RBP8.46□□□□□ -1.06
CCDC171-205ENST00000472806 MUTP22033 750 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 CHRNA5P30532 468 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 CIITAP33076 1130 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 ZNF76P36508 570 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 SREBF1P36956 1147 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 STAT2P52630 851 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 CACNB3P54284 484 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
CCDC171-205ENST00000472806 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 FKBP3Q00688 224 aaKnown RBP8.46□□□□□ -1.06
CCDC171-205ENST00000472806 STK4Q13043 487 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 VWA3BQ502W6 1294 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 FAM26FQ5R3K3 315 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 RAD9BQ6WBX8 426 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 AGBL3Q8NEM8 1001 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 TSC1Q92574 1164 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 GOLGA1Q92805 767 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 HAS1Q92839 578 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 GINM1Q9NU53 330 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 PANK4Q9NVE7 773 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 OGFRQ9NZT2 677 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 PNMA2Q9UL42 364 aa8.46□□□□□ -1.06
CCDC171-205ENST00000472806 EPN1Q9Y6I3 576 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-205ENST00000472806 ZNF646O15015 1829 aaPredicted RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 PSME4Q14997 1843 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 TTC26A0AVF1 554 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 B4DLN1 442 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 H3BM21 787 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 ATP8B1O43520 1251 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 KRT86O43790 486 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 C21orf2O43822 256 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 NDUFA10O95299 355 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 GDF11O95390 407 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 PLA2G4BP0C869 781 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 FCER1AP12319 257 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 VARSP26640 1264 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 PMS1P54277 932 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 PPP2R3AQ06190 1150 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 EHHADHQ08426 723 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 COASYQ13057 564 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 ELF2Q15723 593 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 MEA1Q16626 185 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 PTPN21Q16825 1174 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 KIF4BQ2VIQ3 1234 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 DYMQ7RTS9 669 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 NIM1KQ8IY84 436 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 KIAA0895Q8NCT3 520 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 NAPGQ99747 312 aaPredicted RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 DESI2Q9BSY9 194 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 LUC7LQ9NQ29 371 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 LZTFL1Q9NQ48 299 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 ZNF70Q9UC06 446 aaPredicted RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 FEM1BQ9UK73 627 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 FAM184BQ9ULE4 1060 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 DNM3Q9UQ16 869 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 TMX2Q9Y320 296 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 MRPL11Q9Y3B7 192 aaKnown RBP8.45□□□□□ -1.06
CCDC171-205ENST00000472806 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
CCDC171-205ENST00000472806 EIF3CLB5ME19 914 aaKnown RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms