RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GPR20Q99678 358 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 RIOX1Q9H6W3 641 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 MLXIPQ9HAP2 919 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 RC3H2Q9HBD1 1191 aaKnown RBP10.82□□□□□ -0.68
VCL-204ENST00000472585 TLR9Q9NR96 1032 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 RTEL1Q9NZ71 1219 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 COL4A6Q14031 1691 aa10.82□□□□□ -0.68
VCL-204ENST00000472585 PLXNA3P51805 1871 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 C5orf67F2Z3F1 127 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 ENPP3O14638 875 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 IGHDP01880 384 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 ICAM3P32942 547 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 VCPP55072 806 aaKnown RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 RRP1P56182 461 aaKnown RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 ADAM15Q13444 863 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 KCNV1Q6PIU1 500 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 RTN4RL1Q86UN2 441 aaPredicted RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 SMC5Q8IY18 1101 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 PDCD7Q8N8D1 485 aaKnown RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 INPP4AQ96PE3 977 aaPredicted RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 MAP3K20Q9NYL2 800 aaKnown RBP10.81□□□□□ -0.68
VCL-204ENST00000472585 WDR87Q6ZQQ6 2873 aa10.81□□□□□ -0.68
VCL-204ENST00000472585 KAT6AQ92794 2004 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 MYH6P13533 1939 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 LOC730098B7Z3J9 87 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 GCOM1H8Y6P7 765 aaPredicted RBP10.8□□□□□ -0.68
VCL-204ENST00000472585 ATP9AO75110 1047 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 EYA4O95677 639 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 POLR2MP0CAP2 368 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 DNAJB1P25685 340 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 CCND2P30279 289 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 ID4P47928 161 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 MGAT3Q09327 533 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 LPIN1Q14693 890 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 IFIT1BQ5T764 474 aaKnown RBP10.8□□□□□ -0.68
VCL-204ENST00000472585 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 LINC01599Q8WXQ3 324 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 APBB2Q92870 758 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 ZNF689Q96CS4 500 aaPredicted RBP10.8□□□□□ -0.68
VCL-204ENST00000472585 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 RPGRIP1Q96KN7 1286 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 DSCC1Q9BVC3 393 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 USP26Q9BXU7 913 aa10.8□□□□□ -0.68
VCL-204ENST00000472585 PROB1E7EW31 1015 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 MMP1P03956 469 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 GHRP10912 638 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 CBX2Q14781 532 aaPredicted RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 GRM4Q14833 912 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 METTL7BQ6UX53 244 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 ASCL5Q7RTU5 278 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 CLP1Q92989 425 aaKnown RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 MSLNLQ96KJ4 702 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 AGO3Q9H9G7 860 aaKnown RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 ALG13Q9NP73 1137 aaKnown RBP10.79□□□□□ -0.68
VCL-204ENST00000472585 FRMPD4Q14CM0 1322 aa10.79□□□□□ -0.68
VCL-204ENST00000472585 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 PNMA6FA0A0J9YX94 578 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 GSTTP1A0A1W2PQM5 241 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 MEIS2O14770 477 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 CAND2O75155 1236 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 MFAP1P55081 439 aaKnown RBP10.78□□□□□ -0.68
VCL-204ENST00000472585 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 SP4Q02446 784 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 TROAPQ12815 778 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 COASYQ13057 564 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
VCL-204ENST00000472585 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
VCL-204ENST00000472585 ADGRD2Q7Z7M1 963 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 CHD1LQ86WJ1 897 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 SAMD3Q8N6K7 520 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 EFHBQ8N7U6 833 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 PHF7Q9BWX1 381 aaPredicted RBP10.78□□□□□ -0.68
VCL-204ENST00000472585 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 KRT23Q9C075 422 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 PLAGL2Q9UPG8 496 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 USP15Q9Y4E8 981 aaPredicted RBP10.78□□□□□ -0.68
VCL-204ENST00000472585 PCDHGC5Q9Y5F6 944 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 ADGRA3Q8IWK6 1321 aa10.78□□□□□ -0.68
VCL-204ENST00000472585 BAZ2BQ9UIF8 2168 aaKnown RBP10.77□□□□□ -0.68
VCL-204ENST00000472585 PRR23AA6NEV1 266 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 NOP56O00567 594 aaKnown RBP10.77□□□□□ -0.69
VCL-204ENST00000472585 DGKIO75912 1065 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 GNAT1P11488 350 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms