RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 SIX5Q8N196 739 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 RASGRP4Q8TDF6 673 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 FTHL17Q9BXU8 183 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 MLXIPQ9HAP2 919 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 ENTPD7Q9NQZ7 604 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 DBR1Q9UK59 544 aaKnown RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 RALYQ9UKM9 306 aaKnown RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 ZNF215Q9UL58 517 aaPredicted RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 TNNQ9UQP3 1299 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 FRMPD2Q68DX3 1309 aaPredicted RBP11.99□□□□□ -0.49
CDHR3-209ENST00000472116 FRYLO94915 3013 aa11.99□□□□□ -0.49
CDHR3-209ENST00000472116 ZFHX4Q86UP3 3567 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 GPAA1O43292 621 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 FGF18O76093 207 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 GGPS1O95749 300 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
CDHR3-209ENST00000472116 HOXC8P31273 242 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 HSDL1Q3SXM5 330 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 CELF3Q5SZQ8 465 aaKnown RBP11.98□□□□□ -0.49
CDHR3-209ENST00000472116 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 PLPP4Q5VZY2 271 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
CDHR3-209ENST00000472116 ACSF2Q96CM8 615 aaPredicted RBP11.98□□□□□ -0.49
CDHR3-209ENST00000472116 C16orf70Q9BSU1 422 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 NAPBQ9H115 298 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 ADAM7Q9H2U9 754 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 ERVK-5Q9HDB9 667 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 RALGAPA1Q6GYQ0 2036 aa11.98□□□□□ -0.49
CDHR3-209ENST00000472116 DENND4AQ7Z401 1863 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 RANBP6O60518 1105 aaKnown RBP11.97□□□□□ -0.49
CDHR3-209ENST00000472116 CHRNA1P02708 482 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 LGALS2P05162 132 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 NPR3P17342 541 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 PPARAQ07869 468 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 TDGQ13569 410 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 LPIN1Q14693 890 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 ATAT1Q5SQI0 421 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 CEP85Q6P2H3 762 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 TSHZ1Q6ZSZ6 1077 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 TRMT2AQ8IZ69 625 aaKnown RBP11.97□□□□□ -0.49
CDHR3-209ENST00000472116 IFNL3Q8IZI9 196 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-209ENST00000472116 APPBP2Q92624 585 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 BORCS6Q96GS4 357 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 EHMT1Q9H9B1 1298 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 EPB41L4AQ9HCS5 686 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-209ENST00000472116 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 USTQ9Y2C2 406 aa11.97□□□□□ -0.49
CDHR3-209ENST00000472116 ABCB11O95342 1321 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 DCDC2BA2VCK2 349 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 NMT2O60551 498 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 NR3C2P08235 984 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 IBSPP21815 317 aaPredicted RBP11.96□□□□□ -0.49
CDHR3-209ENST00000472116 ERVFC1P60507 584 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
CDHR3-209ENST00000472116 TCF25Q9BQ70 676 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.49
CDHR3-209ENST00000472116 DUSP12Q9UNI6 340 aa11.96□□□□□ -0.49
CDHR3-209ENST00000472116 ANKRD11Q6UB99 2663 aaPredicted RBP11.96□□□□□ -0.5
CDHR3-209ENST00000472116 PATL2C9JE40 543 aaKnown RBP11.95□□□□□ -0.5
CDHR3-209ENST00000472116 SP9P0CG40 484 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
CDHR3-209ENST00000472116 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
CDHR3-209ENST00000472116 MYCLP12524 364 aaPredicted RBP11.95□□□□□ -0.5
CDHR3-209ENST00000472116 SCG2P13521 617 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 KCNC3Q14003 757 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 SPECC1Q5M775 1068 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 FBXO47Q5MNV8 452 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 XRRA1Q6P2D8 792 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 CDH22Q9UJ99 828 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 USP18Q9UMW8 372 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 LZTS1Q9Y250 596 aa11.95□□□□□ -0.5
CDHR3-209ENST00000472116 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 M0QZ92 97 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 FSCN2O14926 492 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 SPTLC1O15269 473 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 RPLP2P05387 115 aaKnown RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 TGFB3P10600 412 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 CA8P35219 290 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 RARS2Q5T160 578 aaKnown RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 OTOP3Q7RTS5 596 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 SUMF1Q8NBK3 374 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms