RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 Q9Y3F1 56 aa21.76■■□□□ 1.07
CHMP2B-204ENST00000472024 DOCK5Q9H7D0 1870 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 DKC1O60832 514 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 LGR5O75473 907 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 GH1P01241 217 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 SMPD1P17405 629 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 PSMC5P62195 406 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 CCDC144BQ3MJ40 725 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 ZSCAN23Q3MJ62 389 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 MAP3K21Q5TCX8 1036 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 NT5DC1Q5TFE4 455 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 RASSF8Q8NHQ8 419 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 SEPT1Q8WYJ6 367 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 LARP4BQ92615 738 aaKnown RBP21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 GPR20Q99678 358 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 LXNQ9BS40 222 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 WRAP73Q9P2S5 460 aaPredicted RBP21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 HOOK1Q9UJC3 728 aaKnown RBP21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 ZHX1Q9UKY1 873 aaPredicted RBP21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 KIAA1024Q9UPX6 916 aa21.75■■□□□ 1.07
CHMP2B-204ENST00000472024 POTEFA5A3E0 1075 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 NKX3-2P78367 333 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 POTEGQ6S5H5 508 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 DHX37Q8IY37 1157 aaKnown RBP21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 PPTC7Q8NI37 304 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 NACC1Q96RE7 527 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 MLXIPQ9HAP2 919 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 TUBE1Q9UJT0 475 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 TELO2Q9Y4R8 837 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 MAFBQ9Y5Q3 323 aaPredicted RBP21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 WDR81Q562E7 1941 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 LOXHD1Q8IVV2 1947 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 EMSYQ7Z589 1322 aa21.74■■□□□ 1.07
CHMP2B-204ENST00000472024 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 GTPBP6O43824 516 aaPredicted RBP21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 STBD1O95210 358 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 EYA4O95677 639 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 ZNF445P59923 1031 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 CYP4A11Q02928 519 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 POSTNQ15063 836 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 TMEM63BQ5T3F8 832 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 TRPV1Q8NER1 839 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 ATP6V0A1Q93050 837 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 C7orf25Q9BPX7 421 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 DBR1Q9UK59 544 aaKnown RBP21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 FAM184BQ9ULE4 1060 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 DNM3Q9UQ16 869 aa21.73■■□□□ 1.07
CHMP2B-204ENST00000472024 ADCY6O43306 1168 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 HMGCRP04035 888 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 SARSP49591 514 aaKnown RBP21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 SLC12A3P55017 1021 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 TNFAIP2Q03169 654 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 DPYDQ12882 1025 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 CTTNQ14247 550 aaKnown RBP21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 UGCGQ16739 394 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 HSDL1Q3SXM5 330 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 CCDC60Q8IWA6 550 aaPredicted RBP21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 SYT2Q8N9I0 419 aaPredicted RBP21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 COPS5Q92905 334 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 PCYT2Q99447 389 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 LRRC27Q9C0I9 530 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 KIAA1468Q9P260 1216 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 SAMM50Q9Y512 469 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 PCNTO95613 3336 aa21.72■■□□□ 1.07
CHMP2B-204ENST00000472024 FOXN1O15353 648 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 ADCY3O60266 1144 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 PLA2G4BP0C869 781 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 AKR1A1P14550 325 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 PSMC6P62333 389 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 AMPD3Q01432 767 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 ZRSR1Q15695 479 aaKnown RBP21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 CAMK4Q16566 473 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 PRAMEF19Q5SWL8 479 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 SV2BQ7L1I2 683 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 PLPPR4Q7Z2D5 763 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 TPH2Q8IWU9 490 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 SLAIN1Q8ND83 568 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 BANK1Q8NDB2 785 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 SPATA33Q96N06 139 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 PLIN2Q99541 437 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 FUCA2Q9BTY2 467 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 ANKEF1Q9NU02 776 aa21.71■■□□□ 1.07
CHMP2B-204ENST00000472024 A6NJR5 290 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 E9PMD0 336 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 ZNF862O60290 1169 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 SLC26A2P50443 739 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 TRIM9Q9C026 710 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 KCND2Q9NZV8 630 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 GABBR1Q9UBS5 961 aa21.7■■□□□ 1.06
CHMP2B-204ENST00000472024 SEPT4O43236 478 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 DUSP11O75319 330 aaKnown RBP21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 PPFIA4O75335 1185 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 PRR29P0C7W0 189 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 TCF7P36402 384 aaPredicted RBP21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 CACNB2Q08289 660 aaPredicted RBP21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 PNOCQ13519 176 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 MCM6Q14566 821 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 FAM160B1Q5W0V3 765 aa21.69■■□□□ 1.06
CHMP2B-204ENST00000472024 SWSAP1Q6NVH7 229 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms