RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
APLF-204ENST00000471727 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.53
APLF-204ENST00000471727 TCP10L2B9ZVM9 353 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 NR2F2P24468 414 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 PRELPP51888 382 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 USP14P54578 494 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 JAG1P78504 1218 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.54
APLF-204ENST00000471727 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 OTOP1Q7RTM1 612 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 ZNF572Q7Z3I7 529 aaPredicted RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 FMNL3Q8IVF7 1028 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 NELFCDQ8IXH7 590 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 GLIS3Q8NEA6 775 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 SLC5A5Q92911 643 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 NACC1Q96RE7 527 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.54
APLF-204ENST00000471727 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 SCN9AQ15858 1988 aa11.71□□□□□ -0.54
APLF-204ENST00000471727 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 ZNF263O14978 683 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 EPHB6O15197 1021 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 PSMD10O75832 226 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 ASNSP08243 561 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 EPB41P11171 864 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 CAP2P40123 477 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 CYP27A1Q02318 531 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 SMC1AQ14683 1233 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 EPHA7Q15375 998 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 TDRD12Q587J7 1177 aaKnown RBP11.7□□□□□ -0.54
APLF-204ENST00000471727 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 NIPA1Q7RTP0 329 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 EPC1Q9H2F5 836 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 SNX12Q9UMY4 172 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
APLF-204ENST00000471727 NPHP3-ACAD11A0A0J9YXS1 232 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 BTNL10A8MVZ5 291 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 NOL4O94818 638 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 FAM13AO94988 1023 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 CFBP00751 764 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 BCRP11274 1271 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 XRCC5P13010 732 aaKnown RBP11.69□□□□□ -0.54
APLF-204ENST00000471727 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
APLF-204ENST00000471727 SNAP25P60880 206 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 PSMC6P62333 389 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 SFR1Q86XK3 245 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 GOLGA5Q8TBA6 731 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 CAGE1Q8TC20 777 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 SMCR8Q8TEV9 937 aaPredicted RBP11.69□□□□□ -0.54
APLF-204ENST00000471727 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 RIT2Q99578 217 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 BHMT2Q9H2M3 363 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 ODF2LQ9ULJ1 636 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
APLF-204ENST00000471727 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 MEIS1O00470 390 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ENC1O14682 589 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.54
APLF-204ENST00000471727 SLITRK3O94933 977 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ECE1P42892 770 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 POLR2FP61218 127 aaKnown RBP11.68□□□□□ -0.54
APLF-204ENST00000471727 MYBPC2Q14324 1141 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 TNIP1Q15025 636 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ASIC2Q16515 512 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 SLC18A3Q16572 532 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 IFI16Q16666 785 aaKnown RBP11.68□□□□□ -0.54
APLF-204ENST00000471727 RINT1Q6NUQ1 792 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 GBP6Q6ZN66 633 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms