RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SNTG2Q9NY99 539 aa2.27□□□□□ -2.05
UBXN4-207ENST00000471246 CROTQ9UKG9 612 aa2.27□□□□□ -2.05
UBXN4-207ENST00000471246 TELO2Q9Y4R8 837 aa2.27□□□□□ -2.05
UBXN4-207ENST00000471246 KDM2BQ8NHM5 1336 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 FAM221BA6H8Z2 402 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 MROH6A6NGR9 719 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 C9orf118A6NHY6 69 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 AQP7O14520 342 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 FAM153BP0C7A2 387 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 FAHP16930 419 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 MLLT6P55198 1093 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 PAN2Q504Q3 1202 aaKnown RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 SPDYAQ5MJ70 313 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 PHF19Q5T6S3 580 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 CD276Q5ZPR3 534 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 BORAQ6PGQ7 559 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 KCTD1Q719H9 257 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 TRIM48Q8IWZ4 208 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 LGI4Q8N135 537 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 DTX3Q8N9I9 347 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 ZBTB38Q8NAP3 1195 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 TXNDC5Q8NBS9 432 aaKnown RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 SH3RF2Q8TEC5 729 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 CLEC4DQ8WXI8 215 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 PTPRN2Q92932 1015 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 YTHDC1Q96MU7 727 aaKnown RBP2.26□□□□□ -2.05
UBXN4-207ENST00000471246 CD244Q9BZW8 370 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 L2HGDHQ9H9P8 463 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 HSPBP1Q9NZL4 362 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 DSEQ9UL01 958 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 INVSQ9Y283 1065 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 NUB1Q9Y5A7 615 aa2.26□□□□□ -2.05
UBXN4-207ENST00000471246 TCRBV5S4A2TA0A5A2 114 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 ZNF839A8K0R7 811 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 ARVCFO00192 962 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 WNT9AO14904 365 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 B4GALT3O60512 393 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 CYP7B1O75881 506 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 CYP1A1P04798 512 aaPredicted RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 COL6A1P12109 1028 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 IL13P35225 146 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 EPHA5P54756 1037 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 GABREP78334 506 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 GUCY1A3Q02108 690 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 PAK1Q13153 545 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 R3HDM1Q15032 1099 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 SF3A1Q15459 793 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 SKIDA1Q1XH10 827 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 FIGNQ5HY92 759 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 TRMT10BQ6PF06 316 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 GLB1LQ6UWU2 654 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 LRP10Q7Z4F1 713 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 PLEKHH3Q7Z736 793 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 FAM124AQ86V42 546 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 AMER2Q8N7J2 671 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 PMFBP1Q8TBY8 1022 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 MBD6Q96DN6 1003 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 LCORQ96JN0 433 aaPredicted RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 IPO9Q96P70 1041 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 SRPK1Q96SB4 655 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 TMEM168Q9H0V1 697 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 SLC52A2Q9HAB3 445 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 FTSJ1Q9UET6 329 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 NDOR1Q9UHB4 597 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 ZFP69BQ9UJL9 534 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 CBLCQ9ULV8 474 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 SRPK3Q9UPE1 567 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 MRPS23Q9Y3D9 190 aaKnown RBP2.25□□□□□ -2.05
UBXN4-207ENST00000471246 PCDHA8Q9Y5H6 950 aa2.25□□□□□ -2.05
UBXN4-207ENST00000471246 A0A087X1B8 175 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ACOT7O00154 380 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 MAN2B1O00754 1011 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 LAMTOR5O43504 91 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 KLHL18O94889 574 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 FBXO21O94952 628 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 CRTAMO95727 393 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PYGMP11217 842 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PDE6AP16499 860 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PTPN1P18031 435 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 NAT1P18440 290 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 GLRBP48167 497 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ST5P78524 1137 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PFKPQ01813 784 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 RBL2Q08999 1139 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 KIAA2012Q0VF49 1180 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 GPR19Q15760 415 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 SMAD2Q15796 467 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 LONRF2Q1L5Z9 754 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 FAM47CQ5HY64 1035 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 ZNF585AQ6P3V2 769 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PKN3Q6P5Z2 889 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PTRH1Q86Y79 214 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 KLHL36Q8N4N3 616 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 CISD2Q8N5K1 135 aaKnown RBP2.24□□□□□ -2.05
UBXN4-207ENST00000471246 STPG3Q8N7X2 389 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 NUDT10Q8NFP7 164 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 PCDH19Q8TAB3 1148 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 IGDCC4Q8TDY8 1250 aa2.24□□□□□ -2.05
UBXN4-207ENST00000471246 SREK1Q8WXA9 508 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms