RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 RDM1Q8NG50 284 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 HAS1Q92839 578 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 GLT1D1Q96MS3 346 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 TTC12Q9H892 705 aaPredicted RBP10.25□□□□□ -0.77
PTPRE-207ENST00000471218 PRDM6Q9NQX0 595 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 STARD7Q9NQZ5 370 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 RNF146Q9NTX7 359 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 ZNF236Q9UL36 1845 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 SYNGAP1Q96PV0 1343 aa10.25□□□□□ -0.77
PTPRE-207ENST00000471218 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 ALAS1P13196 640 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 ERCC5P28715 1186 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 ZNF76P36508 570 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 TPM4P67936 248 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 DPYDQ12882 1025 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 PPIGQ13427 754 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 TMEM132BQ14DG7 1078 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 ZNF792Q3KQV3 632 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 C9orf50Q5SZB4 431 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 RNF207Q6ZRF8 634 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 USP49Q70CQ1 688 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 RASSF8Q8NHQ8 419 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 NSUN6Q8TEA1 469 aaKnown RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 SLC5A5Q92911 643 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 DHX58Q96C10 678 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 PAGE5Q96GU1 130 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 CDK5RAP3Q96JB5 506 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 PDLIM2Q96JY6 352 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 GAS2L1Q99501 681 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 MPHOSPH6Q99547 160 aaKnown RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 POLR3CQ9BUI4 534 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 RAVER2Q9HCJ3 691 aaKnown RBP10.24□□□□□ -0.77
PTPRE-207ENST00000471218 SERTAD1Q9UHV2 236 aa10.24□□□□□ -0.77
PTPRE-207ENST00000471218 PARP14Q460N5 1801 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PRUNE2Q8WUY3 3088 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 RLFQ13129 1914 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 A0A087X0B3 334 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PVALEFA0A1B0GWK0 134 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 A0A1W2PQ45 241 aaPredicted RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 A0A1W2PQY0 241 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TRIM43BA6NCK2 446 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 FAM86B1E9PN63 330 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 NFIBO00712 420 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TLR3O15455 904 aaKnown RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 DUSP11O75319 330 aaKnown RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TIMP1P01033 207 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 FAM86B2P0C5J1 330 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 RPA1P27694 616 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 CCND2P30279 289 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 HOXA13P31271 388 aaPredicted RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TECP42680 631 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TXKP42681 527 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 RPS6P62753 249 aaKnown RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 SPIRE1Q08AE8 756 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 MORC3Q14149 939 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 DHX8Q14562 1220 aaKnown RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PRR16Q569H4 304 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 NAALADL2Q58DX5 795 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PRAMEF19Q5SWL8 479 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 MAMDC4Q6UXC1 1216 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TMEM199Q8N511 208 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 C7orf25Q9BPX7 421 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 MXRA8Q9BRK3 442 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
PTPRE-207ENST00000471218 ABHD16BQ9H3Z7 469 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TUFT1Q9NNX1 390 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PXMP2Q9NR77 195 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TBC1D22BQ9NU19 505 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 KCND2Q9NZV8 630 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 UBIAD1Q9Y5Z9 338 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 TTC28Q96AY4 2481 aa10.23□□□□□ -0.77
PTPRE-207ENST00000471218 BECN2A8MW95 431 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 GOLGA6L19H0YKK7 550 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 MSH4O15457 936 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 PQBP1O60828 265 aaKnown RBP10.22□□□□□ -0.77
PTPRE-207ENST00000471218 PSMD10O75832 226 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 PLCG1P19174 1290 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 CST5P28325 142 aaPredicted RBP10.22□□□□□ -0.77
PTPRE-207ENST00000471218 ACLYP53396 1101 aa10.22□□□□□ -0.77
PTPRE-207ENST00000471218 SNAP25P60880 206 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms