RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 CCND1P24385 295 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 CD40P25942 277 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 AFMP43652 599 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 LRRC32Q14392 662 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 NR1I3Q14994 352 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 SEC23AQ15436 765 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 PTPN21Q16825 1174 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 ABCB5Q2M3G0 1257 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 INAVAQ3KP66 663 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 ZNF792Q3KQV3 632 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 FRMD7Q6ZUT3 714 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 NME9Q86XW9 330 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
PRPF3-204ENST00000470824 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 FUBP3Q96I24 572 aaKnown RBP eCLIP5.41□□□□□ -1.54
PRPF3-204ENST00000470824 ZDHHC5Q9C0B5 715 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 RC3H2Q9HBD1 1191 aaKnown RBP5.41□□□□□ -1.54
PRPF3-204ENST00000470824 C14orf119Q9NWQ9 140 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 GEMIN8Q9NWZ8 242 aaKnown RBP5.41□□□□□ -1.54
PRPF3-204ENST00000470824 TELO2Q9Y4R8 837 aa5.41□□□□□ -1.54
PRPF3-204ENST00000470824 GOLGA8AA7E2F4 631 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 FOXP2O15409 715 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 HYAL3O43820 417 aaPredicted RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 C4BPAP04003 597 aaKnown RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 SDHAP31040 664 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 FNTBP49356 437 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 GALK1P51570 392 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 SCAND1P57086 179 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 ERVFRD-1P60508 538 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 ADCY1Q08828 1119 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 SLC9A5Q14940 896 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 EPHA7Q15375 998 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 PGM2L1Q6PCE3 622 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 CHPFQ8IZ52 775 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 CAMKK2Q96RR4 588 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 SLC13A1Q9BZW2 595 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 ZMAT4Q9H898 229 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 RXFP1Q9HBX9 757 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 TOPORSQ9NS56 1045 aaPredicted RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 ZIM2Q9NZV7 527 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 KCNG1Q9UIX4 513 aa5.4□□□□□ -1.54
PRPF3-204ENST00000470824 YBX2Q9Y2T7 364 aaKnown RBP5.4□□□□□ -1.54
PRPF3-204ENST00000470824 PRAMEF25A6NGN4 478 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 ADAMTS4O75173 837 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 SNUPNO95149 360 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 MT-CO1P00395 513 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 IARSP41252 1262 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 HERVK_113P62684 666 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 GRIN1Q05586 938 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 TMEM62Q0P6H9 643 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 RAB3GAP1Q15042 981 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 PAN2Q504Q3 1202 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 CATSPEREQ5SY80 951 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 WDR75Q8IWA0 830 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 ARRDC4Q8NCT1 418 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 TTLL11Q8NHH1 800 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 FAXDC2Q96IV6 333 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 C16orf92Q96LL3 132 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 C8orf48Q96LL4 319 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 RNF32Q9H0A6 362 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 CDH19Q9H159 772 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 MKS1Q9NXB0 559 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 USP36Q9P275 1121 aaKnown RBP5.39□□□□□ -1.55
PRPF3-204ENST00000470824 MRFAP1Q9Y605 127 aa5.39□□□□□ -1.55
PRPF3-204ENST00000470824 NUDT19A8MXV4 375 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 ACOT7O00154 380 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 KDM1AO60341 852 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 SCGB1D2O95969 90 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 RBP3P10745 1247 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 LRRC41Q15345 812 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 ESRP1Q6NXG1 681 aaKnown RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 PNMA8AQ86V59 439 aaPredicted RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 AMOTL1Q8IY63 956 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 FLAD1Q8NFF5 587 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 LMBR1Q8WVP7 490 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 RTF1Q92541 710 aaKnown RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 E2F7Q96AV8 911 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 KIRREL1Q96J84 757 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 ACAP3Q96P50 834 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 GBP4Q96PP9 640 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 LUC7LQ9NQ29 371 aaKnown RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 MSRAQ9UJ68 235 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 ZNF180Q9UJW8 692 aa5.38□□□□□ -1.55
PRPF3-204ENST00000470824 LUC7L2Q9Y383 392 aaKnown RBP5.38□□□□□ -1.55
PRPF3-204ENST00000470824 TRIM75PA6NK02 468 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 BTBD11A6QL63 1104 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 KIF3BO15066 747 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 ABLIM3O94929 683 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 CT47B1P0C2W7 299 aaPredicted RBP5.37□□□□□ -1.55
PRPF3-204ENST00000470824 FAHP16930 419 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
PRPF3-204ENST00000470824 SDHBP21912 280 aa5.37□□□□□ -1.55
PRPF3-204ENST00000470824 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms