RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 DDX58O95786 925 aaKnown RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 PCCAP05165 728 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 CXCL9Q07325 125 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 PPP2R5EQ16537 467 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 SOGA3Q5TF21 947 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 DNAJC5GQ8N7S2 189 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 OR6P1Q8NGX9 317 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 SYTL5Q8TDW5 730 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 PSMD1Q99460 953 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 TAF1DQ9H5J8 278 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 GREM2Q9H772 168 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 DBNDD1Q9H9R9 158 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 PCDHB10Q9UN67 800 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 PCDHB12Q9Y5F1 795 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 TIAM2Q8IVF5 1701 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 ZNF521Q96K83 1311 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 ARFGEF2Q9Y6D5 1785 aa8.48□□□□□ -1.05
PTP4A1-202ENST00000470661 DDX60Q8IY21 1712 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 A0A1W2PQH9 124 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 SHOXO15266 292 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 SIGLEC6O43699 453 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 HK2P52789 917 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 GNL2Q13823 731 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 GCKRQ14397 625 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 EPHA10Q5JZY3 1008 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 AXDND1Q5T1B0 1012 aaPredicted RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 CCDC191Q8NCU4 936 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 ENOX1Q8TC92 643 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 DNAAF4Q8WXU2 420 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 JDP2Q8WYK2 163 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 TCTN2Q96GX1 697 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 ADAMTS10Q9H324 1103 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 ZNF214Q9UL59 606 aaPredicted RBP8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 MRVI1Q9Y6F6 885 aa8.47□□□□□ -1.05
PTP4A1-202ENST00000470661 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.05
PTP4A1-202ENST00000470661 RIC1Q4ADV7 1423 aa8.46□□□□□ -1.05
PTP4A1-202ENST00000470661 PDE8AO60658 829 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 EPHX2P34913 555 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 CASP7P55210 303 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 SLFN5Q08AF3 891 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 VPS37DQ86XT2 251 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 NIM1KQ8IY84 436 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 DAGLBQ8NCG7 672 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 MXD3Q9BW11 206 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 STRIP2Q9ULQ0 834 aa8.46□□□□□ -1.06
PTP4A1-202ENST00000470661 TRAF5O00463 557 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 BIN1O00499 593 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 JUNBP17275 347 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 KLRK1P26718 216 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 GDNFP39905 211 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 GMPSP49915 693 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 CTSWP56202 376 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 TEKQ02763 1124 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 NEXNQ0ZGT2 675 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 BEND3Q5T5X7 828 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 FYB2Q5VWT5 728 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 ZNF655Q8N720 491 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 C19orf47Q8N9M1 422 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 SMC1BQ8NDV3 1235 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 FOXP3Q9BZS1 431 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 TMX4Q9H1E5 349 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 TMEM59LQ9UK28 342 aa8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 SCAF8Q9UPN6 1271 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-202ENST00000470661 PSMD14O00487 310 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 FKTNO75072 461 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 UFL1O94874 794 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 SYPP08247 313 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 ERVFC1P60507 584 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 FOXO4P98177 505 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 KIAA2012Q0VF49 1180 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 CCDC152Q4G0S7 254 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 GPC2Q8N158 579 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 TNNQ9UQP3 1299 aa8.44□□□□□ -1.06
PTP4A1-202ENST00000470661 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 PLIN1O60240 522 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 ECE2O60344 883 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 TAF5LO75529 589 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 DNAJA1P31689 397 aaKnown RBP8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 CTSKP43235 329 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 FSTL1Q12841 308 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 GNPTABQ3T906 1256 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 CIAPIN1Q6FI81 312 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 ANKRD18AQ8IVF6 992 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 LINS1Q8NG48 757 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms