RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 CHRNA1P02708 482 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 ARP10275 920 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 MARCH8Q5T0T0 291 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 APBB2Q92870 758 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 LMCD1Q9NZU5 365 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 SIP14410 1827 aa35.75■■■■□ 3.31
HMG20B-209ENST00000470356 BDP1A6H8Y1 2624 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 REC8O95072 547 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 SCG2P13521 617 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 RSPH3Q86UC2 560 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 AZI2Q9H6S1 392 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 SUGCTQ9HAC7 445 aa35.74■■■■□ 3.31
HMG20B-209ENST00000470356 AGO4Q9HCK5 861 aaKnown RBP35.74■■■■□ 3.31
HMG20B-209ENST00000470356 COL4A4P53420 1690 aaPredicted RBP35.74■■■■□ 3.31
HMG20B-209ENST00000470356 ACTR2P61160 394 aa35.73■■■■□ 3.31
HMG20B-209ENST00000470356 SKIV2LQ15477 1246 aaKnown RBP35.73■■■■□ 3.31
HMG20B-209ENST00000470356 TOP1MTQ969P6 601 aa35.73■■■■□ 3.31
HMG20B-209ENST00000470356 AGXT2Q9BYV1 514 aa35.73■■■■□ 3.31
HMG20B-209ENST00000470356 IFIH1Q9BYX4 1025 aaKnown RBP35.73■■■■□ 3.31
HMG20B-209ENST00000470356 NID2Q14112 1375 aa35.73■■■■□ 3.31
HMG20B-209ENST00000470356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP35.72■■■■□ 3.31
HMG20B-209ENST00000470356 RRN3P2A6NIE6 340 aa35.72■■■■□ 3.31
HMG20B-209ENST00000470356 RPS6KB1P23443 525 aa35.72■■■■□ 3.31
HMG20B-209ENST00000470356 ITGB3BPQ13352 177 aaPredicted RBP35.72■■■■□ 3.31
HMG20B-209ENST00000470356 NIPA1Q7RTP0 329 aa35.72■■■■□ 3.31
HMG20B-209ENST00000470356 SP7Q8TDD2 431 aaPredicted RBP35.72■■■■□ 3.31
HMG20B-209ENST00000470356 MTUS1Q9ULD2 1270 aa35.72■■■■□ 3.31
HMG20B-209ENST00000470356 ESYT2A0FGR8 921 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 INSRRP14616 1297 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 ZNF76P36508 570 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 PLPPR4Q7Z2D5 763 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 GDPD5Q8WTR4 605 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 TNPO1Q92973 898 aaKnown RBP35.71■■■■□ 3.31
HMG20B-209ENST00000470356 ZMYND12Q9H0C1 365 aa35.71■■■■□ 3.31
HMG20B-209ENST00000470356 PRPF3O43395 683 aaKnown RBP35.7■■■■□ 3.31
HMG20B-209ENST00000470356 RPLP2P05387 115 aaKnown RBP35.7■■■■□ 3.31
HMG20B-209ENST00000470356 PSMA5P28066 241 aa35.7■■■■□ 3.31
HMG20B-209ENST00000470356 MGAT3Q09327 533 aa35.7■■■■□ 3.31
HMG20B-209ENST00000470356 AAK1Q2M2I8 961 aa35.7■■■■□ 3.31
HMG20B-209ENST00000470356 JAKMIP3Q5VZ66 844 aa35.7■■■■□ 3.31
HMG20B-209ENST00000470356 DNAJB3Q8WWF6 145 aa35.7■■■■□ 3.31
HMG20B-209ENST00000470356 TCF20Q9UGU0 1960 aaKnown RBP35.69■■■■□ 3.3
HMG20B-209ENST00000470356 ATG7O95352 703 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 STAT5BP51692 787 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 PKN1Q16512 942 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 MCTP2Q6DN12 878 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 IL27Q8NEV9 243 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 ADAMTS19Q8TE59 1207 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 CCDC12Q8WUD4 166 aaPredicted RBP35.69■■■■□ 3.3
HMG20B-209ENST00000470356 CRYGNQ8WXF5 182 aa35.69■■■■□ 3.3
HMG20B-209ENST00000470356 CYP3A4P08684 503 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 GHRP10912 638 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 IGBP1P78318 339 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 TFF2Q03403 129 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 C6orf50Q9HD87 102 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 COG5Q9UP83 839 aa35.68■■■■□ 3.3
HMG20B-209ENST00000470356 FAM86B1E9PN63 330 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 TNFRSF10AO00220 468 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 UPP2O95045 317 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 FAM86B2P0C5J1 330 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 LPIN1Q14693 890 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 PLCB4Q15147 1175 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 YME1L1Q96TA2 773 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 TRPC6Q9Y210 931 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 MUC3AQ02505 3323 aa35.67■■■■□ 3.3
HMG20B-209ENST00000470356 EPB41L2O43491 1005 aaKnown RBP35.66■■■■□ 3.3
HMG20B-209ENST00000470356 EVCP57679 992 aa35.66■■■■□ 3.3
HMG20B-209ENST00000470356 PLA2G4DQ86XP0 818 aa35.66■■■■□ 3.3
HMG20B-209ENST00000470356 C17orf80Q9BSJ5 609 aa35.66■■■■□ 3.3
HMG20B-209ENST00000470356 IGKV6D-21A0A0A0MT36 114 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 BMP1P13497 986 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 SLC26A2P50443 739 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 NTRK3Q16288 839 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 REXO1Q8N1G1 1221 aaKnown RBP35.65■■■■□ 3.3
HMG20B-209ENST00000470356 FBXO22Q8NEZ5 403 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 CDY2AQ9Y6F7 541 aa35.65■■■■□ 3.3
HMG20B-209ENST00000470356 TTC3P53804 2025 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 IGLV3-22A0A075B6J6 115 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 CCNE2O96020 404 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 GNA11P29992 359 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 MRPS6P82932 125 aaKnown RBP35.64■■■■□ 3.3
HMG20B-209ENST00000470356 AKAP17AQ02040 695 aaKnown RBP35.64■■■■□ 3.3
HMG20B-209ENST00000470356 FBXO47Q5MNV8 452 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 PHKBQ93100 1093 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 ZBTB10Q96DT7 871 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 SAMD11Q96NU1 681 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 FAM49AQ9H0Q0 323 aaPredicted RBP35.64■■■■□ 3.3
HMG20B-209ENST00000470356 PCDHA2Q9Y5H9 948 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 XIRP2A4UGR9 3374 aa35.64■■■■□ 3.3
HMG20B-209ENST00000470356 COL4A6Q14031 1691 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 POTEB3A0JP26 581 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 ADAMTS3O15072 1205 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 DHX15O43143 795 aaKnown RBP35.63■■■■□ 3.29
HMG20B-209ENST00000470356 IER5Q5VY09 327 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 POTEBQ6S5H4 581 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 ABHD15Q6UXT9 468 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 HLA-CQ95604 372 aa35.63■■■■□ 3.29
HMG20B-209ENST00000470356 UHRF1Q96T88 793 aaPredicted RBP35.63■■■■□ 3.29
HMG20B-209ENST00000470356 RNF26Q9BY78 433 aaPredicted RBP35.63■■■■□ 3.29
HMG20B-209ENST00000470356 LOXHD1Q8IVV2 1947 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms