RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 PBKQ96KB5 322 aa14.42□□□□□ -0.1
SFXN3-205ENST00000470252 GPR101Q96P66 508 aaPredicted RBP14.42□□□□□ -0.1
SFXN3-205ENST00000470252 SRP68Q9UHB9 627 aaKnown RBP14.42□□□□□ -0.1
SFXN3-205ENST00000470252 CTNNA1P35221 906 aaKnown RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 ZNF772Q68DY9 489 aaPredicted RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 SCFD2Q8WU76 684 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 SCFD1Q8WVM8 642 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 LRRC45Q96CN5 670 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 SPAG5Q96R06 1193 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 GPCPD1Q9NPB8 672 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 EMILIN3Q9NT22 766 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 BCCIPQ9P287 314 aaKnown RBP eCLIP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 PCDHA12Q9UN75 941 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 BTNL10A8MVZ5 291 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 UAP1Q16222 522 aaPredicted RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 ZNF571Q7Z3V5 609 aaPredicted RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 GPBP1Q86WP2 473 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 LRRC47Q8N1G4 583 aaKnown RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
SFXN3-205ENST00000470252 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 KIAA1024Q9UPX6 916 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 PCDHA2Q9Y5H9 948 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 NHSQ6T4R5 1651 aa14.41□□□□□ -0.1
SFXN3-205ENST00000470252 SPATA31A1Q5TZJ5 1347 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 TMCO5BA8MYB1 307 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 H0YGN5 161 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 TM4SF1P30408 202 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 IFI16Q16666 785 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 KCTD19Q17RG1 926 aaPredicted RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 C10orf76Q5T2E6 689 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 EIF1ADQ8N9N8 165 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 ACTRT1Q8TDG2 376 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 UBLCP1Q8WVY7 318 aaPredicted RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 CYFIP2Q96F07 1278 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 NT5C3AQ9H0P0 336 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 DDX47Q9H0S4 455 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 NEUROG2Q9H2A3 272 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 NFS1Q9Y697 457 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 SRRM3A6NNA2 597 aaPredicted RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 CETN3O15182 167 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 PLA2G4BP0C869 781 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 SLC9A1P19634 815 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 IRF2BP2Q7Z5L9 587 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 GPATCH11Q8N954 259 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 HDAC9Q9UKV0 1011 aa14.4□□□□□ -0.1
SFXN3-205ENST00000470252 NOC2LQ9Y3T9 749 aaKnown RBP14.4□□□□□ -0.1
SFXN3-205ENST00000470252 COL24A1Q17RW2 1714 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
SFXN3-205ENST00000470252 NR2F2P24468 414 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 ACTN3Q08043 901 aaPredicted RBP14.39□□□□□ -0.11
SFXN3-205ENST00000470252 ASPRV1Q53RT3 343 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 METTL13Q8N6R0 699 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 LRRC57Q8N9N7 239 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 QTRT2Q9H974 415 aaKnown RBP14.39□□□□□ -0.11
SFXN3-205ENST00000470252 GGA2Q9UJY4 613 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 FBXL5Q9UKA1 691 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 POTEB3A0JP26 581 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 GMNCA6NCL1 334 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 POTECB2RU33 542 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 KRIT1O00522 736 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 FLT3P36888 993 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 ALKBH5Q6P6C2 394 aaKnown RBP14.39□□□□□ -0.11
SFXN3-205ENST00000470252 POTEBQ6S5H4 581 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 CALR3Q96L12 384 aaKnown RBP14.39□□□□□ -0.11
SFXN3-205ENST00000470252 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.111e-8■■■□□ 18.7
SFXN3-205ENST00000470252 NAGPAQ9UK23 515 aa14.39□□□□□ -0.11
SFXN3-205ENST00000470252 GPR75-ASB3A0A0A6YYF3 556 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 UCHL3P15374 230 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 TMOD1P28289 359 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 BIRC3Q13489 604 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 HYIQ5T013 277 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 C6orf89Q6UWU4 347 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 CLEC10AQ8IUN9 316 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 CUL5Q93034 780 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 LEMD3Q9Y2U8 911 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 BZW2Q9Y6E2 419 aaKnown RBP14.38□□□□□ -0.11
SFXN3-205ENST00000470252 DAPK3O43293 454 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 CYP11B2P19099 503 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 NOVP48745 357 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 PSEN1P49768 467 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 NFIXQ14938 502 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 EDRF1Q3B7T1 1238 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 CCDC121Q6ZUS5 278 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 PEX26Q7Z412 305 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
SFXN3-205ENST00000470252 TPCN2Q8NHX9 752 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
SFXN3-205ENST00000470252 AMACRQ9UHK6 382 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms