RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 RRN3P2A6NIE6 340 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 GOLGA8AA7E2F4 631 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 GOLGA8BA8MQT2 603 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 GHRP10912 638 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 ADCY7P51828 1080 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 MGAT3Q09327 533 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 EPC2Q52LR7 807 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 CEP55Q53EZ4 464 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 MARCH8Q5T0T0 291 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 SDF4Q9BRK5 362 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 ANO3Q9BYT9 981 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 AZI2Q9H6S1 392 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 BARHL2Q9NY43 387 aa19.98■□□□□ 0.79
COL7A1-208ENST00000470076 NLRC5Q86WI3 1866 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 KLF18A0A0U1RQI7 1052 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 SMCO2A6NFE2 343 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 STXBP3O00186 592 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 AP3B2Q13367 1082 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 CYP2W1Q8TAV3 490 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 DNAJB3Q8WWF6 145 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 PCYT2Q99447 389 aa19.97■□□□□ 0.79
COL7A1-208ENST00000470076 RALGAPA2Q2PPJ7 1873 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 INSRRP14616 1297 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 SREBF1P36956 1147 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 ACTR2P61160 394 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 IGBP1P78318 339 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 LPIN1Q14693 890 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 PTPROQ16827 1216 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 PLPPR4Q7Z2D5 763 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 MRPL38Q96DV4 380 aaKnown RBP19.96■□□□□ 0.79
COL7A1-208ENST00000470076 PGBD1Q96JS3 809 aa19.96■□□□□ 0.79
COL7A1-208ENST00000470076 FAM217BQ9NTX9 383 aaPredicted RBP19.96■□□□□ 0.79
COL7A1-208ENST00000470076 CCDC196A0A1B0GTZ2 297 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 H3BNC9 293 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 MEIS1O00470 390 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 ARP10275 920 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 CDC27P30260 824 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 CLK2P49760 499 aaKnown RBP19.95■□□□□ 0.78
COL7A1-208ENST00000470076 MRPS6P82932 125 aaKnown RBP19.95■□□□□ 0.78
COL7A1-208ENST00000470076 FGD1P98174 961 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 FBXO47Q5MNV8 452 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 TSHZ1Q6ZSZ6 1077 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 TMEM192Q8IY95 271 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 IL17RAQ96F46 866 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 UBE2ZQ9H832 354 aaPredicted RBP19.95■□□□□ 0.78
COL7A1-208ENST00000470076 AGO4Q9HCK5 861 aaKnown RBP19.95■□□□□ 0.78
COL7A1-208ENST00000470076 TRPC6Q9Y210 931 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 CDY2AQ9Y6F7 541 aa19.95■□□□□ 0.78
COL7A1-208ENST00000470076 TTC3P53804 2025 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-208ENST00000470076 SLC26A2P50443 739 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 STAT5BP51692 787 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 ITGB3BPQ13352 177 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-208ENST00000470076 GPM6BQ13491 265 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 IER5Q5VY09 327 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 NIPA1Q7RTP0 329 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 FIBCD1Q8N539 461 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 NAP1L2Q9ULW6 460 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-208ENST00000470076 SQORQ9Y6N5 450 aa19.94■□□□□ 0.78
COL7A1-208ENST00000470076 ENPP3O14638 875 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 ATG7O95352 703 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 ZNF76P36508 570 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 METAP2P50579 478 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL7A1-208ENST00000470076 PLCB4Q15147 1175 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 PFKFB3Q16875 520 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-208ENST00000470076 TIGD5Q53EQ6 642 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 FAM49AQ9H0Q0 323 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-208ENST00000470076 TMEM260Q9NX78 707 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 PCDHA2Q9Y5H9 948 aa19.93■□□□□ 0.78
COL7A1-208ENST00000470076 M0QZ92 97 aa19.92■□□□□ 0.78
COL7A1-208ENST00000470076 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
COL7A1-208ENST00000470076 MCTP2Q6DN12 878 aa19.92■□□□□ 0.78
COL7A1-208ENST00000470076 KCNB2Q92953 911 aa19.92■□□□□ 0.78
COL7A1-208ENST00000470076 C1QTNF1Q9BXJ1 281 aa19.92■□□□□ 0.78
COL7A1-208ENST00000470076 RWDD3Q9Y3V2 267 aa19.92■□□□□ 0.78
COL7A1-208ENST00000470076 ESYT2A0FGR8 921 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 POTEB3A0JP26 581 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 RB1P06400 928 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 SCG2P13521 617 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 COL9A1P20849 921 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 LEXMQ3ZCV2 418 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 POTEBQ6S5H4 581 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 BANK1Q8NDB2 785 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 CCDC12Q8WUD4 166 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-208ENST00000470076 ZBTB10Q96DT7 871 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 FTHL17Q9BXU8 183 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 AGO3Q9H9G7 860 aaKnown RBP19.91■□□□□ 0.78
COL7A1-208ENST00000470076 RC3H2Q9HBD1 1191 aaKnown RBP19.91■□□□□ 0.78
COL7A1-208ENST00000470076 TRPV2Q9Y5S1 764 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 LOXHD1Q8IVV2 1947 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 ADGRA3Q8IWK6 1321 aa19.91■□□□□ 0.78
COL7A1-208ENST00000470076 MYO7AQ13402 2215 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 IGKV6D-21A0A0A0MT36 114 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 SMIM35A0A1B0GVV1 85 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 C5orf67F2Z3F1 127 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 CYP3A4P08684 503 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 KCNA5P22460 613 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 CD52P31358 61 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 HSPA4P34932 840 aa19.9■□□□□ 0.78
COL7A1-208ENST00000470076 CTNNB1P35222 781 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms