RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
FAM228B-203ENST00000469867 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SERINC5Q86VE9 423 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 GDPD2Q9HCC8 539 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 TREHO43280 583 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 STAM2O75886 525 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 RBL2Q08999 1139 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 HEATR3Q7Z4Q2 680 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 GPR20Q99678 358 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 SETD4Q9NVD3 440 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 MTUS1Q9ULD2 1270 aa13.24□□□□□ -0.29
FAM228B-203ENST00000469867 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CXCL10P02778 98 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CALM1P0DP23 149 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CALM2P0DP24 149 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CALM3P0DP25 149 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 ICAM3P32942 547 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 SCRN1Q12765 414 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 TJAP1Q5JTD0 557 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 UTP14CQ5TAP6 766 aaKnown RBP13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 MYO7AQ13402 2215 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 TRIOO75962 3097 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 ATP9AO75110 1047 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 CTSHP09668 335 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 ZSCAN20P17040 1043 aaPredicted RBP13.23□□□□□ -0.29
FAM228B-203ENST00000469867 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
FAM228B-203ENST00000469867 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 DBF4BQ8NFT6 615 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 SH2B1Q9NRF2 756 aaPredicted RBP13.23□□□□□ -0.29
FAM228B-203ENST00000469867 THEGQ9P2T0 379 aa13.23□□□□□ -0.29
FAM228B-203ENST00000469867 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
FAM228B-203ENST00000469867 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 ITGB5P18084 799 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 IKBKEQ14164 716 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 FOSBP53539 338 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 TFF2Q03403 129 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 GTF3C6Q969F1 213 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 ZSCAN31Q96LW9 406 aaPredicted RBP13.22□□□□□ -0.29
FAM228B-203ENST00000469867 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
FAM228B-203ENST00000469867 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 GJB5O95377 273 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 HOXC8P31273 242 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 FERMT3Q86UX7 667 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 STX6O43752 255 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 LGR5O75473 907 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 MARK3P27448 753 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 MTMR1Q13613 665 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 CLEC17AQ6ZS10 378 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 LMBR1Q8WVP7 490 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.29
FAM228B-203ENST00000469867 PGBD1Q96JS3 809 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 AGXT2Q9BYV1 514 aa13.21□□□□□ -0.29
FAM228B-203ENST00000469867 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
FAM228B-203ENST00000469867 KCNA2P16389 499 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 XRRA1Q6P2D8 792 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
FAM228B-203ENST00000469867 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
FAM228B-203ENST00000469867 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
FAM228B-203ENST00000469867 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
FAM228B-203ENST00000469867 DNTTIP2Q5QJE6 756 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms