RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ZNF862O60290 1169 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 F2P00734 622 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 PSAPP07602 524 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 COL6A1P12109 1028 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 MARK3P27448 753 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 SFNP31947 248 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 KRT85P78386 507 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 UBE2Q1Q7Z7E8 422 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 ANKLE1Q8NAG6 615 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 DYDC2Q96IM9 177 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 EIF2AK1Q9BQI3 630 aaKnown RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 MTG1Q9BT17 334 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 ZNF302Q9NR11 478 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 GABBR1Q9UBS5 961 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 MORC2Q9Y6X9 1032 aaPredicted RBP16.63■□□□□ 0.25
COL9A3-209ENST00000469852 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
COL9A3-209ENST00000469852 HAS3O00219 553 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 BACH1O14867 736 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 ZEB2O60315 1214 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 MED24O75448 989 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 PSEN2P49810 448 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 EPHA7Q15375 998 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 RDM1Q8NG50 284 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
COL9A3-209ENST00000469852 CSRNP2Q9H175 543 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 LRWD1Q9UFC0 647 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 CFAP45Q9UL16 551 aa16.62■□□□□ 0.25
COL9A3-209ENST00000469852 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
COL9A3-209ENST00000469852 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-209ENST00000469852 H3BRB1 525 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 PPP6R2O75170 966 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 SLITRK3O94933 977 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 STAT5BP51692 787 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 CTTNQ14247 550 aaKnown RBP16.61■□□□□ 0.25
COL9A3-209ENST00000469852 PDIA5Q14554 519 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 MFSD10Q14728 455 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 ECM1Q16610 540 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 KIAA0753Q2KHM9 967 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 GLG1Q92896 1179 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 HSD17B14Q9BPX1 270 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 SENP6Q9GZR1 1112 aaPredicted RBP16.61■□□□□ 0.25
COL9A3-209ENST00000469852 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
COL9A3-209ENST00000469852 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
COL9A3-209ENST00000469852 A0A087WWV3 80 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 TMEM150BA6NC51 233 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 ZBTB39O15060 712 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 KPNA6O60684 536 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 STBD1O95210 358 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 PRKCEQ02156 737 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 HIC1Q14526 733 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 AXDND1Q5T1B0 1012 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-209ENST00000469852 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 TRMT1LQ7Z2T5 733 aaKnown RBP16.6■□□□□ 0.25
COL9A3-209ENST00000469852 CATSPER3Q86XQ3 398 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
COL9A3-209ENST00000469852 SPATA32Q96LK8 384 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 GLT1D1Q96MS3 346 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 LXNQ9BS40 222 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 C11orf49Q9H6J7 331 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 PCDHA7Q9UN72 937 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
COL9A3-209ENST00000469852 POTEB3A0JP26 581 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 P4HBP07237 508 aaKnown RBP16.59■□□□□ 0.25
COL9A3-209ENST00000469852 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
COL9A3-209ENST00000469852 ATN1P54259 1190 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-209ENST00000469852 ITGA7Q13683 1181 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 FAM160B1Q5W0V3 765 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 POTEBQ6S5H4 581 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 SNX29Q8TEQ0 813 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 EPSTI1Q96J88 318 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 ARID2Q68CP9 1835 aa16.59■□□□□ 0.25
COL9A3-209ENST00000469852 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.25
COL9A3-209ENST00000469852 CABYRO75952 493 aa16.58■□□□□ 0.24
COL9A3-209ENST00000469852 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
COL9A3-209ENST00000469852 QARSP47897 775 aaKnown RBP16.58■□□□□ 0.24
COL9A3-209ENST00000469852 ME1P48163 572 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms