RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 IQSEC1Q6DN90 963 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 ESRP1Q6NXG1 681 aaKnown RBP5.67□□□□□ -1.5
VPS8-220ENST00000469713 CC2D1AQ6P1N0 951 aaPredicted RBP5.67□□□□□ -1.5
VPS8-220ENST00000469713 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 PASD1Q8IV76 773 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 DIRC2Q96SL1 478 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 MS4A5Q9H3V2 200 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 NSUN3Q9H649 340 aaKnown RBP5.67□□□□□ -1.5
VPS8-220ENST00000469713 KCNK12Q9HB15 430 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 VTA1Q9NP79 307 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS8-220ENST00000469713 DTLQ9NZJ0 730 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 ARID1BQ8NFD5 2236 aaPredicted RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 HRKO00198 91 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 FOXP2O15409 715 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 ULK1O75385 1050 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 LRG1P02750 347 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 ASGR2P07307 311 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 MMEP08473 750 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 FBLN1P23142 703 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 SDHAP31040 664 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 MTMR1Q13613 665 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 TERF2Q15554 542 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 SMAD2Q15796 467 aaKnown RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 BROXQ5VW32 411 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 OLFML2BQ68BL8 750 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 PRR23BQ6ZRT6 265 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 AMIGO3Q86WK7 504 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 CNTD1Q8N815 330 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 CLRN3Q8NCR9 226 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 MTMR8Q96EF0 704 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 TOE1Q96GM8 510 aaKnown RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 CCDC8Q9H0W5 538 aaPredicted RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 ZMAT4Q9H898 229 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 ACSS2Q9NR19 701 aa5.66□□□□□ -1.5
VPS8-220ENST00000469713 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.66□□□□□ -1.5
VPS8-220ENST00000469713 MYOCOSA0A1B0GUC4 107 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.65□□□□□ -1.5
VPS8-220ENST00000469713 LCHNA4D1U4 455 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 NCKAP1LP55160 1127 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 EXOSC10Q01780 885 aaKnown RBP5.65□□□□□ -1.5
VPS8-220ENST00000469713 ITKQ08881 620 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 CR1LQ2VPA4 569 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 TEPPQ6URK8 271 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 ASB15Q8WXK1 588 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 SCYL1Q96KG9 808 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 PUS7LQ9H0K6 701 aaKnown RBP5.65□□□□□ -1.5
VPS8-220ENST00000469713 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 EPB41L4BQ9H329 900 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
VPS8-220ENST00000469713 CYP17A1P05093 508 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 C8BP07358 591 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 TMEM253P0C7T8 217 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 LSP1P33241 339 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 THBS2P35442 1172 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 MC3RP41968 323 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 FNTBP49356 437 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 SESN3P58005 492 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 PHC1P78364 1004 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 MLANAQ16655 118 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 CD276Q5ZPR3 534 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 CD300LDQ6UXZ3 194 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 RTF1Q92541 710 aaKnown RBP5.64□□□□□ -1.51
VPS8-220ENST00000469713 ERCC4Q92889 916 aaPredicted RBP5.64□□□□□ -1.51
VPS8-220ENST00000469713 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 GBP4Q96PP9 640 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 CEP89Q96ST8 783 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 SMAD5Q99717 465 aaKnown RBP5.64□□□□□ -1.51
VPS8-220ENST00000469713 ASPSCR1Q9BZE9 553 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 MCOLN1Q9GZU1 580 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 CNTD2Q9H8S5 307 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 DCP1AQ9NPI6 582 aaPredicted RBP5.64□□□□□ -1.51
VPS8-220ENST00000469713 SIRT5Q9NXA8 310 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 KLHL42Q9P2K6 505 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 TRHDEQ9UKU6 1024 aa5.64□□□□□ -1.51
VPS8-220ENST00000469713 PAX4O43316 350 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 S100BP04271 92 aaPredicted RBP5.63□□□□□ -1.51
VPS8-220ENST00000469713 TAL1P17542 331 aaPredicted RBP5.63□□□□□ -1.51
VPS8-220ENST00000469713 AOAHP28039 575 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 MC4RP32245 332 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 TXKP42681 527 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 CDR1P51861 262 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 HERVK_113P62684 666 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 DBPQ10586 325 aaPredicted RBP5.63□□□□□ -1.51
VPS8-220ENST00000469713 LRRC32Q14392 662 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 EPHA7Q15375 998 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 GPR158Q5T848 1215 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 LDHDQ86WU2 507 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 ZNF610Q8N9Z0 462 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 DDX11Q96FC9 970 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
VPS8-220ENST00000469713 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms