RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PRODHO43272 600 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 DLX3O60479 287 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 PABPC1P11940 636 aaKnown RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 ENDOUP21128 410 aaKnown RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 RPL10P27635 214 aaKnown RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 CANXP27824 592 aaKnown RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 SCRN1Q12765 414 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 NSMFQ6X4W1 530 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 KREMEN2Q8NCW0 462 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 ZSWIM2Q8NEG5 633 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 KISS1RQ969F8 398 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 ZNF496Q96IT1 587 aaPredicted RBP7.91□□□□□ -1.14
PTCD3-208ENST00000469585 G6PC3Q9BUM1 346 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 PRDM7Q9NQW5 492 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 ERVK13-1Q9NX77 482 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 VIRMAQ69YN4 1812 aaKnown RBP7.9□□□□□ -1.14
PTCD3-208ENST00000469585 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 PNPLA7Q6ZV29 1317 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 DNAJC25-GNG10A0A024R161 153 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 ESYT3A0FGR9 886 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 SMARCA5O60264 1052 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-208ENST00000469585 CPP00450 1065 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 SNRPB2P08579 225 aaKnown RBP7.9□□□□□ -1.14
PTCD3-208ENST00000469585 MAP4K2Q12851 820 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 RALGPS1Q5JS13 557 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 FAM209AQ5JX71 171 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 SLC35F1Q5T1Q4 408 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 ARTNQ5T4W7 220 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 EEF1DP3Q658K8 133 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 SCUBE1Q8IWY4 988 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 TMEM145Q8NBT3 493 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 TMEM52Q8NDY8 209 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 LINC01599Q8WXQ3 324 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 ALPK1Q96QP1 1244 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 CDADC1Q9BWV3 514 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 MYH16Q9H6N6 1097 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 EBF1Q9UH73 591 aa7.9□□□□□ -1.14
PTCD3-208ENST00000469585 COL15A1P39059 1388 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ENPP3O14638 875 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 THBDP07204 575 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ZGLP1P0C6A0 271 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 CYP19A1P11511 503 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-208ENST00000469585 L1CAMP32004 1257 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 IL6STP40189 918 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ECI1P42126 302 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ITPK1Q13572 414 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 PRSS53Q2L4Q9 553 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 DENND5AQ6IQ26 1287 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 SDE2Q6IQ49 451 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 COL23A1Q86Y22 540 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-208ENST00000469585 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 FRS2Q8WU20 508 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 KCTD13Q8WZ19 329 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 FCRL2Q96LA5 508 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-208ENST00000469585 CDC6Q99741 560 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 DHRS4Q9BTZ2 278 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 STK31Q9BXU1 1019 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ADAMTS10Q9H324 1103 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 GPRC5CQ9NQ84 441 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 IFT57Q9NWB7 429 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 SLAMF8Q9P0V8 285 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 ADAMTS6Q9UKP5 1117 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 LRP5O75197 1615 aa7.89□□□□□ -1.15
PTCD3-208ENST00000469585 SOS1Q07889 1333 aaPredicted RBP7.88□□□□□ -1.15
PTCD3-208ENST00000469585 TRBV23-1A0A0A0MS06 115 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 ARNTLO00327 626 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 HOXB7P09629 217 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 EIF2S2P20042 333 aaKnown RBP7.88□□□□□ -1.15
PTCD3-208ENST00000469585 SEPHS1P49903 392 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 TP53INP2Q8IXH6 220 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 MAP6Q96JE9 813 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 PTCHD1Q96NR3 888 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 THUMPD2Q9BTF0 503 aaKnown RBP7.88□□□□□ -1.15
PTCD3-208ENST00000469585 FANCLQ9NW38 375 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 MIS18AQ9NYP9 233 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 TMEM59LQ9UK28 342 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 MRPS23Q9Y3D9 190 aaKnown RBP7.88□□□□□ -1.15
PTCD3-208ENST00000469585 QSER1Q2KHR3 1735 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 PAPPAQ13219 1627 aa7.88□□□□□ -1.15
PTCD3-208ENST00000469585 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 ADAMTS7Q9UKP4 1686 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 CCDC163A0A0D9SF12 145 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 DDX58O95786 925 aaKnown RBP7.87□□□□□ -1.15
PTCD3-208ENST00000469585 HSP90B1P14625 803 aaKnown RBP7.87□□□□□ -1.15
PTCD3-208ENST00000469585 KCNJ6P48051 423 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 EIF4A1P60842 406 aaKnown RBP7.87□□□□□ -1.15
PTCD3-208ENST00000469585 ST5P78524 1137 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 PLCL1Q15111 1095 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 KSR1Q8IVT5 923 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 WDR63Q8IWG1 891 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 APPBP2Q92624 585 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 TMX4Q9H1E5 349 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-208ENST00000469585 MBNL3Q9NUK0 354 aaKnown RBP7.87□□□□□ -1.15
PTCD3-208ENST00000469585 C19orf73Q9NVV2 129 aa7.87□□□□□ -1.15
PTCD3-208ENST00000469585 DLG5Q8TDM6 1919 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms