RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PCDH18Q9HCL0 1135 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 CICQ96RK0 1608 aaPredicted RBP6.74□□□□□ -1.33
VPS8-219ENST00000469479 C10orf71Q711Q0 1435 aa6.74□□□□□ -1.33
VPS8-219ENST00000469479 WDR90Q96KV7 1748 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 SHOXO15266 292 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 MCM4P33991 863 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 CRKP46108 304 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
VPS8-219ENST00000469479 BORAQ6PGQ7 559 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 GLB1LQ6UWU2 654 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 KISS1RQ969F8 398 aaPredicted RBP6.73□□□□□ -1.33
VPS8-219ENST00000469479 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
VPS8-219ENST00000469479 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
VPS8-219ENST00000469479 FHOD1Q9Y613 1164 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 BTAF1O14981 1849 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 IGSF1Q8N6C5 1336 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 TTC21AQ8NDW8 1320 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 KDM2BQ8NHM5 1336 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 PCNTO95613 3336 aa6.73□□□□□ -1.33
VPS8-219ENST00000469479 COL18A1P39060 1754 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 ANKRD36BQ8N2N9 1353 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 ACVRL1P37023 503 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 PMS1P54277 932 aaKnown RBP6.72□□□□□ -1.33
VPS8-219ENST00000469479 CRB2Q5IJ48 1285 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 USP51Q70EK9 711 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 COPRSQ9NQ92 184 aa6.72□□□□□ -1.33
VPS8-219ENST00000469479 CCNL1Q9UK58 526 aaPredicted RBP6.72□□□□□ -1.33
VPS8-219ENST00000469479 PIK3C2AO00443 1686 aa6.71□□□□□ -1.33
VPS8-219ENST00000469479 C9IYK1 514 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 SLPIP03973 132 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 ZNF445P59923 1031 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 POU4F1Q01851 419 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 APOBRQ0VD83 1088 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 SH3RF3Q8TEJ3 882 aaPredicted RBP6.71□□□□□ -1.34
VPS8-219ENST00000469479 TIMELESSQ9UNS1 1208 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 QRICH2Q9H0J4 1663 aa6.71□□□□□ -1.34
VPS8-219ENST00000469479 USP47Q96K76 1375 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 FZD7O75084 574 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 HSPA1AP0DMV8 641 aaKnown RBP6.7□□□□□ -1.34
VPS8-219ENST00000469479 HSPA1BP0DMV9 641 aaKnown RBP6.7□□□□□ -1.34
VPS8-219ENST00000469479 RPL13P26373 211 aaKnown RBP6.7□□□□□ -1.34
VPS8-219ENST00000469479 COL23A1Q86Y22 540 aaPredicted RBP6.7□□□□□ -1.34
VPS8-219ENST00000469479 ZFPM1Q8IX07 1006 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 LZTR1Q8N653 840 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 SMC1BQ8NDV3 1235 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 BRF1Q92994 677 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 SSBP3Q9BWW4 388 aaPredicted RBP6.7□□□□□ -1.34
VPS8-219ENST00000469479 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 GP6Q9HCN6 339 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 ZNF536O15090 1300 aa6.7□□□□□ -1.34
VPS8-219ENST00000469479 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 CYP2C8P10632 490 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 CRIP3Q6Q6R5 217 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 SPRED1Q7Z699 444 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 FIBCD1Q8N539 461 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 CDK5RAP1Q96SZ6 601 aaKnown RBP6.69□□□□□ -1.34
VPS8-219ENST00000469479 UBP1Q9NZI7 540 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 NFAT5O94916 1531 aa6.69□□□□□ -1.34
VPS8-219ENST00000469479 A0A087WZG4 1122 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 CD3EP07766 207 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 TGFB2P61812 414 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
VPS8-219ENST00000469479 SURF1Q15526 300 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 EEF1DP3Q658K8 133 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 RCSD1Q6JBY9 416 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 SLITRK4Q8IW52 837 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 Q8N1X5 172 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 WDR26Q9H7D7 661 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 RXFP1Q9HBX9 757 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 NMRK2Q9NPI5 230 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 TTC21BQ7Z4L5 1316 aa6.68□□□□□ -1.34
VPS8-219ENST00000469479 CENPJQ9HC77 1338 aaPredicted RBP6.68□□□□□ -1.34
VPS8-219ENST00000469479 PXDNLA1KZ92 1463 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 IFNGR1P15260 489 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 CD247P20963 164 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 THBS2P35442 1172 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 DCAF15Q66K64 600 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 FBXO33Q7Z6M2 555 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 TAB3Q8N5C8 712 aaPredicted RBP6.67□□□□□ -1.34
VPS8-219ENST00000469479 NKD1Q969G9 470 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 DDX11Q96FC9 970 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 C11orf84Q9BUA3 381 aaPredicted RBP6.67□□□□□ -1.34
VPS8-219ENST00000469479 ADAMTS1Q9UHI8 967 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 ST6GALNAC2Q9UJ37 374 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
VPS8-219ENST00000469479 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
VPS8-219ENST00000469479 TUBGCP6Q96RT7 1819 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 ACRP10323 421 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 ITGA4P13612 1032 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 AXDND1Q5T1B0 1012 aaPredicted RBP6.66□□□□□ -1.34
VPS8-219ENST00000469479 KYQ8NBH2 561 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 GORASP1Q9BQQ3 440 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 NT5C1AQ9BXI3 368 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 LY75O60449 1722 aa6.66□□□□□ -1.34
VPS8-219ENST00000469479 EVC2Q86UK5 1308 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms