RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TPX2Q9ULW0 747 aaKnown RBP5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SYNPO2Q9UMS6 1093 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 TRIM33Q9UPN9 1127 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 KCNMB2Q9Y691 235 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ITIH6Q6UXX5 1313 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 WDR17Q8IZU2 1322 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 SYNRGQ9UMZ2 1314 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ARHGEF40Q8TER5 1519 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 LRRC7Q96NW7 1537 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 MAP3K4Q9Y6R4 1608 aa5.36□□□□□ -1.55
SF3B1-207ENST00000468925 ZCCHC11Q5TAX3 1644 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 NPATQ14207 1427 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 GMNCA6NCL1 334 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PSMD14O00487 310 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 BIRC5O15392 142 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ICMTO60725 284 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PHACTR2O75167 634 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 RNF8O76064 485 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 TMCC1O94876 653 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ATP6V1G2O95670 118 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 BAG3O95817 575 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 LMNAP02545 664 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PAEPP09466 180 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 VCAM1P19320 739 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 GBP1P32455 592 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CCT6AP40227 531 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MDH1P40925 334 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 RBM5P52756 815 aaKnown RBP eCLIP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 NRLP54845 237 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ATP8B2P98198 1209 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SAFB2Q14151 953 aaKnown RBP eCLIP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ITIH4Q14624 930 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ENOX2Q16206 610 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PTGISQ16647 500 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 KBTBD12Q3ZCT8 623 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF569Q5MCW4 686 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SPTY2D1Q68D10 685 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF746Q6NUN9 644 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 BLOC1S2Q6QNY1 142 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 LRIG3Q6UXM1 1119 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ARMCX6Q7L4S7 300 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MAATS1Q7Z4T9 603 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 NLRP14Q86W24 1093 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MYLK4Q86YV6 388 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ZSCAN29Q8IWY8 852 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 C16orf71Q8IYS4 520 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MMGT1Q8N4V1 131 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 FSIP1Q8NA03 581 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MLKLQ8NB16 471 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ZCRB1Q8TBF4 217 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 MYCBPAPQ8TBZ2 947 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 AENQ8WTP8 325 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CENPTQ96BT3 561 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ZBTB10Q96DT7 871 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 THOC1Q96FV9 657 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CLIC6Q96NY7 704 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SMC6Q96SB8 1091 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CCT8L2Q96SF2 557 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SELENOOQ9BVL4 669 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SSBP4Q9BWG4 385 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 TSGA10Q9BZW7 698 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 LACRTQ9GZZ8 138 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 C19orf44Q9H6X5 657 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 CCSER2Q9H7U1 834 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SLC39A2Q9NP94 309 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 ATXN10Q9UBB4 475 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 TUBE1Q9UJT0 475 aa5.35□□□□□ -1.55
SF3B1-207ENST00000468925 PAIP2BQ9ULR5 123 aaKnown RBP5.35□□□□□ -1.55
SF3B1-207ENST00000468925 SETD1AO15047 1707 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ITSN1Q15811 1721 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 KNDC1Q76NI1 1749 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 QRICH2Q9H0J4 1663 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 PXDNLA1KZ92 1463 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ABCC12Q96J65 1359 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 FAM237AA0A1B0GTK4 181 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC162PA2VCL2 907 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 UBAP1LF5GYI3 381 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 IFIT3O14879 490 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ATP5HO75947 161 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ZNF202O95125 648 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ANP32DO95626 131 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 P4HBP07237 508 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 H2AFB2P0C5Z0 115 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 RHOXF2BP0C7M4 288 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 HARSP12081 509 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CPA3P15088 417 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 CMA1P23946 247 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 DNAJA1P31689 397 aaKnown RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 PDE6BP35913 854 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ME1P48163 572 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 KRT83P78385 493 aa5.34□□□□□ -1.55
SF3B1-207ENST00000468925 LACTBP83111 547 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-207ENST00000468925 ATP11AP98196 1134 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms