RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 IFNL3Q8IZI9 196 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 TXNDC5Q8NBS9 432 aaKnown RBP7.16□□□□□ -1.26
LSM5-209ENST00000468872 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.26
LSM5-209ENST00000468872 PHOSPHO1Q8TCT1 267 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 SMOC1Q9H4F8 434 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 SLC6A20Q9NP91 592 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 MROH6A6NGR9 719 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 K7ESM1 405 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ARVCFO00192 962 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 KRIT1O00522 736 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 MAFKO60675 156 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ADRB1P08588 477 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 KCNA6P17658 529 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 SOX5P35711 763 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 PCBP1Q15365 356 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM5-209ENST00000468872 CYP4F22Q6NT55 531 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 MTDHQ86UE4 582 aaKnown RBP7.15□□□□□ -1.26
LSM5-209ENST00000468872 PPM1KQ8N3J5 372 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 MTFR1LQ9H019 292 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ASH2LQ9UBL3 628 aa7.15□□□□□ -1.26
LSM5-209ENST00000468872 ITGB3P05106 788 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 JMJD7P0C870 316 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 ZNF28P17035 718 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 PRAMEF18Q5VWM3 479 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 CLIC6Q96NY7 704 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 TMEM209Q96SK2 561 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 WASF3Q9UPY6 502 aa7.14□□□□□ -1.27
LSM5-209ENST00000468872 KPNA6O60684 536 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 NAT1P18440 290 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 NEK4P51957 841 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
LSM5-209ENST00000468872 CT47A1Q5JQC4 288 aaPredicted RBP7.13□□□□□ -1.27
LSM5-209ENST00000468872 CDCA2Q69YH5 1023 aaPredicted RBP7.13□□□□□ -1.27
LSM5-209ENST00000468872 ZCCHC8Q6NZY4 707 aaKnown RBP7.13□□□□□ -1.27
LSM5-209ENST00000468872 PKN3Q6P5Z2 889 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 HHIPL2Q6UWX4 724 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 DBX2Q6ZNG2 339 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 OTOP3Q7RTS5 596 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 STRA8Q7Z7C7 330 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 FAM124AQ86V42 546 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 TRIM48Q8IWZ4 208 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 LGI4Q8N135 537 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 LEO1Q8WVC0 666 aaPredicted RBP7.13□□□□□ -1.27
LSM5-209ENST00000468872 RBM15Q96T37 977 aaKnown RBP eCLIP7.13□□□□□ -1.27
LSM5-209ENST00000468872 HSPBP1Q9NZL4 362 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
LSM5-209ENST00000468872 SLC27A2O14975 620 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 GRK2P25098 689 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 IL13P35225 146 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 GRK3P35626 688 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 CDKN1CP49918 316 aaPredicted RBP7.12□□□□□ -1.27
LSM5-209ENST00000468872 PAK1Q13153 545 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 KIZQ2M2Z5 673 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 CFAP100Q494V2 611 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 TBC1D10BQ4KMP7 808 aaPredicted RBP7.12□□□□□ -1.27
LSM5-209ENST00000468872 BORAQ6PGQ7 559 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 DDX42Q86XP3 938 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSM5-209ENST00000468872 AHI1Q8N157 1196 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 TTLL11Q8NHH1 800 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 CLEC4DQ8WXI8 215 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 LCORQ96JN0 433 aaPredicted RBP7.12□□□□□ -1.27
LSM5-209ENST00000468872 ALG1Q9BT22 464 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 JAG2Q9Y219 1238 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 ATP8A1Q9Y2Q0 1164 aa7.12□□□□□ -1.27
LSM5-209ENST00000468872 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 B4E1Z4 1266 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 PLATP00750 562 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 CKMP06732 381 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 FLT3P36888 993 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
LSM5-209ENST00000468872 PIK3R6Q5UE93 754 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 ZC3H7AQ8IWR0 971 aaKnown RBP7.11□□□□□ -1.27
LSM5-209ENST00000468872 PRPF38AQ8NAV1 312 aaKnown RBP7.11□□□□□ -1.27
LSM5-209ENST00000468872 YTHDC1Q96MU7 727 aaKnown RBP7.11□□□□□ -1.27
LSM5-209ENST00000468872 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 L2HGDHQ9H9P8 463 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 CROTQ9UKG9 612 aa7.11□□□□□ -1.27
LSM5-209ENST00000468872 WNT9AO14904 365 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 RAB11FIP3O75154 756 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 CYP7B1O75881 506 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 GLRX3O76003 335 aaKnown RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 NPTXRO95502 500 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 SOD2P04179 222 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 CYP1A1P04798 512 aaPredicted RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 SRGAP2CP0DJJ0 459 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 COL6A2P12110 1019 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 EVA1CP58658 441 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 GRIN1Q05586 938 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 ZNF827Q17R98 1081 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 UBE2R2Q712K3 238 aaPredicted RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 DDX46Q7L014 1031 aaKnown RBP7.1□□□□□ -1.27
LSM5-209ENST00000468872 GGNQ86UU5 652 aa7.1□□□□□ -1.27
LSM5-209ENST00000468872 PROSER1Q86XN7 944 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms