RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SCRN1Q12765 414 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 PPFIA1Q13136 1202 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 ANKRD1Q15327 319 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 TCTN1Q2MV58 587 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 PLPPR4Q7Z2D5 763 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 FAM177A1Q8N128 213 aaPredicted RBP19.44■□□□□ 0.7
SSBP1-207ENST00000468267 AZI2Q9H6S1 392 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 MYH9P35579 1960 aaKnown RBP19.44■□□□□ 0.7
SSBP1-207ENST00000468267 CDKL5O76039 1030 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 CCNE2O96020 404 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 MYOGP15173 224 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 WDR5P61964 334 aaKnown RBP19.43■□□□□ 0.7
SSBP1-207ENST00000468267 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
SSBP1-207ENST00000468267 GRIK4Q16099 956 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 SLC28A3Q9HAS3 691 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 PCDHA4Q9UN74 947 aa19.43■□□□□ 0.7
SSBP1-207ENST00000468267 IGKV6D-21A0A0A0MT36 114 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 ABHD14A-ACY1A0A1B0GW23 586 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 MBLAC1A4D2B0 266 aaPredicted RBP19.42■□□□□ 0.7
SSBP1-207ENST00000468267 EDIL3O43854 480 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 KCNJ6P48051 423 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 STAT5BP51692 787 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 USP11P51784 963 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 AK2P54819 239 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 IKBKEQ14164 716 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 PRR16Q569H4 304 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 FAM26DQ5JW98 314 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 MARCH8Q5T0T0 291 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 ABHD15Q6UXT9 468 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 RPAINQ86UA6 219 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 HERC6Q8IVU3 1022 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 AIFM3Q96NN9 605 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 UIMC1Q96RL1 719 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 ZNF577Q9BSK1 485 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 TBC1D22BQ9NU19 505 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 MICAL3Q7RTP6 2002 aa19.42■□□□□ 0.7
SSBP1-207ENST00000468267 WDR81Q562E7 1941 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 CUL9Q8IWT3 2517 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 RRN3P2A6NIE6 340 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 DDX39AO00148 427 aaKnown RBP19.41■□□□□ 0.7
SSBP1-207ENST00000468267 EFCAB14O75071 495 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 CTSHP09668 335 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 INSRRP14616 1297 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 FOSL2P15408 326 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 PLCB4Q15147 1175 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 PLEKHG4Q58EX7 1191 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 GALNT17Q6IS24 598 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 RUFY4Q6ZNE9 571 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 BLIDQ8IZY5 108 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 DAGLBQ8NCG7 672 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
SSBP1-207ENST00000468267 LENG9Q96B70 501 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 TUBE1Q9UJT0 475 aa19.41■□□□□ 0.7
SSBP1-207ENST00000468267 RBAK-RBAKDNI3L0D1 243 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 M0R2N6 131 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 SLC26A2P50443 739 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 NPY5RQ15761 445 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 DBF4BQ8NFT6 615 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 C22orf23Q9BZE7 217 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 PRDM12Q9H4Q4 367 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 TRPC6Q9Y210 931 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 STK36Q9NRP7 1315 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 REV3LO60673 3130 aa19.4■□□□□ 0.7
SSBP1-207ENST00000468267 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 CTDNEP1O95476 244 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 CHRNA1P02708 482 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 NEK4P51957 841 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 IGBP1P78318 339 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 DEFB103AP81534 67 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 FAM160B1Q5W0V3 765 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 PPP2R2DQ66LE6 453 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 ZNF746Q6NUN9 644 aaPredicted RBP19.39■□□□□ 0.69
SSBP1-207ENST00000468267 MIS18BP1Q6P0N0 1132 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 RSPH3Q86UC2 560 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 MAFAQ8NHW3 353 aaPredicted RBP19.39■□□□□ 0.69
SSBP1-207ENST00000468267 TBCKQ8TEA7 893 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 EVPLQ92817 2033 aa19.39■□□□□ 0.69
SSBP1-207ENST00000468267 BACH1O14867 736 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 CA3P07451 260 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 MKRN4PQ13434 485 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-207ENST00000468267 ME3Q16798 604 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 CCDC60Q8IWA6 550 aaPredicted RBP19.38■□□□□ 0.69
SSBP1-207ENST00000468267 DNAJB3Q8WWF6 145 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 SEPT8Q92599 483 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 PHF20Q9BVI0 1012 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 ZNF302Q9NR11 478 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 KCNJ14Q9UNX9 436 aa19.38■□□□□ 0.69
SSBP1-207ENST00000468267 LOXHD1Q8IVV2 1947 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 CYP3A7-CYP3A51PA0A087WV96 503 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 MSH4O15457 936 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 TLL1O43897 1013 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 RPLP2P05387 115 aaKnown RBP19.37■□□□□ 0.69
SSBP1-207ENST00000468267 CYP3A7P24462 503 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 KRT76Q01546 638 aa19.37■□□□□ 0.69
SSBP1-207ENST00000468267 SWSAP1Q6NVH7 229 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms