RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DNAJB3Q8WWF6 145 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 KCNB2Q92953 911 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 LMCD1Q9NZU5 365 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 SLC9A2Q9UBY0 812 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 TUBE1Q9UJT0 475 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 COG5Q9UP83 839 aa27.99■■■□□ 2.07
PTCH1-210ENST00000468211 ADAMTS3O15072 1205 aa27.98■■■□□ 2.07
PTCH1-210ENST00000468211 CLK2P49760 499 aaKnown RBP27.98■■■□□ 2.07
PTCH1-210ENST00000468211 IGBP1P78318 339 aa27.98■■■□□ 2.07
PTCH1-210ENST00000468211 ITGB3BPQ13352 177 aaPredicted RBP27.98■■■□□ 2.07
PTCH1-210ENST00000468211 LPIN1Q14693 890 aa27.98■■■□□ 2.07
PTCH1-210ENST00000468211 AAK1Q2M2I8 961 aa27.98■■■□□ 2.07
PTCH1-210ENST00000468211 TAF2Q6P1X5 1199 aa27.98■■■□□ 2.07
PTCH1-210ENST00000468211 INSRRP14616 1297 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 APOBRQ0VD83 1088 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 CEP55Q53EZ4 464 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 FBXO22Q8NEZ5 403 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 APBB2Q92870 758 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 HLA-CQ95604 372 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 YME1L1Q96TA2 773 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 AGO4Q9HCK5 861 aaKnown RBP27.97■■■□□ 2.07
PTCH1-210ENST00000468211 NAP1L2Q9ULW6 460 aaPredicted RBP27.97■■■□□ 2.07
PTCH1-210ENST00000468211 RALGAPA2Q2PPJ7 1873 aa27.97■■■□□ 2.07
PTCH1-210ENST00000468211 NFASCO94856 1347 aa27.96■■■□□ 2.07
PTCH1-210ENST00000468211 FOSP01100 380 aaPredicted RBP27.96■■■□□ 2.07
PTCH1-210ENST00000468211 SREBF1P36956 1147 aa27.96■■■□□ 2.07
PTCH1-210ENST00000468211 ACTR2P61160 394 aa27.96■■■□□ 2.07
PTCH1-210ENST00000468211 COL4A6Q14031 1691 aa27.96■■■□□ 2.07
PTCH1-210ENST00000468211 ATG2AQ2TAZ0 1938 aa27.96■■■□□ 2.07
PTCH1-210ENST00000468211 hCG_1984214I3L0E3 225 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 MEIS1O00470 390 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 RCAN1P53805 252 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 PLCB4Q15147 1175 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 EPC2Q52LR7 807 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 Q6ZUG5 572 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 ZNF713Q8N859 430 aaPredicted RBP27.95■■■□□ 2.06
PTCH1-210ENST00000468211 TRAPPC12Q8WVT3 735 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 SDF4Q9BRK5 362 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 SNX14Q9Y5W7 946 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 CDY2AQ9Y6F7 541 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 TTC3P53804 2025 aa27.95■■■□□ 2.06
PTCH1-210ENST00000468211 HMGB1P09429 215 aaKnown RBP27.94■■■□□ 2.06
PTCH1-210ENST00000468211 FBXO47Q5MNV8 452 aa27.94■■■□□ 2.06
PTCH1-210ENST00000468211 JAKMIP3Q5VZ66 844 aa27.94■■■□□ 2.06
PTCH1-210ENST00000468211 TEX2Q8IWB9 1127 aa27.94■■■□□ 2.06
PTCH1-210ENST00000468211 JAKMIP1Q96N16 626 aaKnown RBP27.94■■■□□ 2.06
PTCH1-210ENST00000468211 FAM49AQ9H0Q0 323 aaPredicted RBP27.94■■■□□ 2.06
PTCH1-210ENST00000468211 CCNE2O96020 404 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 HSPA4P34932 840 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 METAP2P50579 478 aaKnown RBP eCLIP27.93■■■□□ 2.06
PTCH1-210ENST00000468211 AP3B2Q13367 1082 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 PFKFB3Q16875 520 aaPredicted RBP27.93■■■□□ 2.06
PTCH1-210ENST00000468211 RSPH3Q86UC2 560 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 BRF1Q92994 677 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 AZI2Q9H6S1 392 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 AGO3Q9H9G7 860 aaKnown RBP27.93■■■□□ 2.06
PTCH1-210ENST00000468211 TRPC6Q9Y210 931 aa27.93■■■□□ 2.06
PTCH1-210ENST00000468211 EVPLQ92817 2033 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 MYO7AQ13402 2215 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 RRN3P2A6NIE6 340 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 FAM86B1E9PN63 330 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 ATG7O95352 703 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 FAM86B2P0C5J1 330 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 SCG2P13521 617 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 MRPS6P82932 125 aaKnown RBP27.92■■■□□ 2.06
PTCH1-210ENST00000468211 FGD1P98174 961 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 PKN1Q16512 942 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 CRYGNQ8WXF5 182 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 UIMC1Q96RL1 719 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 WDR81Q562E7 1941 aa27.92■■■□□ 2.06
PTCH1-210ENST00000468211 DDX39AO00148 427 aaKnown RBP27.91■■■□□ 2.06
PTCH1-210ENST00000468211 ENPP3O14638 875 aa27.91■■■□□ 2.06
PTCH1-210ENST00000468211 STAT5BP51692 787 aa27.91■■■□□ 2.06
PTCH1-210ENST00000468211 PLPPR4Q7Z2D5 763 aa27.91■■■□□ 2.06
PTCH1-210ENST00000468211 TMEM192Q8IY95 271 aa27.91■■■□□ 2.06
PTCH1-210ENST00000468211 MYH9P35579 1960 aaKnown RBP27.9■■■□□ 2.06
PTCH1-210ENST00000468211 IGLV3-22A0A075B6J6 115 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 ZNF76P36508 570 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 TMEM62Q0P6H9 643 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 LINC01599Q8WXQ3 324 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 SAMD11Q96NU1 681 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 GLT8D2Q9H1C3 349 aa27.9■■■□□ 2.06
PTCH1-210ENST00000468211 NID2Q14112 1375 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 IGKV6D-21A0A0A0MT36 114 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 H3BNC9 293 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 DHX15O43143 795 aaKnown RBP27.89■■■□□ 2.06
PTCH1-210ENST00000468211 PPFIA3O75145 1194 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 LINC00271P0C7V0 271 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 CD52P31358 61 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 GPM6BQ13491 265 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 BLOC1S2Q6QNY1 142 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 TSHZ1Q6ZSZ6 1077 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 NIPA1Q7RTP0 329 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 PLA2G4DQ86XP0 818 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 PHKBQ93100 1093 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 MRPL38Q96DV4 380 aaKnown RBP27.89■■■□□ 2.06
PTCH1-210ENST00000468211 IL17RAQ96F46 866 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 ZMYND12Q9H0C1 365 aa27.89■■■□□ 2.06
PTCH1-210ENST00000468211 RC3H2Q9HBD1 1191 aaKnown RBP27.89■■■□□ 2.06
PTCH1-210ENST00000468211 KIAA1671Q9BY89 1806 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms