RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 IKBKEQ14164 716 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 FAM26DQ5JW98 314 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 MARCH8Q5T0T0 291 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 BLIDQ8IZY5 108 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 DAGLBQ8NCG7 672 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 ZNF577Q9BSK1 485 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 NKX2-4Q9H2Z4 354 aa20.62■□□□□ 0.89
CGREF1-208ENST00000467539 MBLAC1A4D2B0 266 aaPredicted RBP20.61■□□□□ 0.89
CGREF1-208ENST00000467539 M0R2N6 131 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 INSRRP14616 1297 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 SLC26A2P50443 739 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 GRIK4Q16099 956 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 TCTN1Q2MV58 587 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 PRR16Q569H4 304 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 TAF2Q6P1X5 1199 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 AIFM3Q96NN9 605 aa20.61■□□□□ 0.89
CGREF1-208ENST00000467539 KIF28PB7ZC32 967 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 KCNJ6P48051 423 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 NEK4P51957 841 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 WDR5P61964 334 aaKnown RBP20.6■□□□□ 0.89
CGREF1-208ENST00000467539 PLCB4Q15147 1175 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 NPY5RQ15761 445 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 PLEKHG4Q58EX7 1191 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 HERC6Q8IVU3 1022 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 DBF4BQ8NFT6 615 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 LENG9Q96B70 501 aa20.6■□□□□ 0.89
CGREF1-208ENST00000467539 STK36Q9NRP7 1315 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 CYP3A7-CYP3A51PA0A087WV96 503 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
CGREF1-208ENST00000467539 CTDNEP1O95476 244 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 MYOGP15173 224 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 CYP3A7P24462 503 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 ME3Q16798 604 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 FAM160B1Q5W0V3 765 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 ZNF746Q6NUN9 644 aaPredicted RBP20.59■□□□□ 0.89
CGREF1-208ENST00000467539 MIS18BP1Q6P0N0 1132 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 SLC17A8Q8NDX2 589 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 TBCKQ8TEA7 893 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 TUBE1Q9UJT0 475 aa20.59■□□□□ 0.89
CGREF1-208ENST00000467539 CHD9Q3L8U1 2897 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 POTEB3A0JP26 581 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 RPLP2P05387 115 aaKnown RBP20.58■□□□□ 0.89
CGREF1-208ENST00000467539 XBP1P17861 261 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 SWSAP1Q6NVH7 229 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 POTEBQ6S5H4 581 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 RUFY4Q6ZNE9 571 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 SMAP1Q8IYB5 467 aaPredicted RBP20.58■□□□□ 0.89
CGREF1-208ENST00000467539 UIMC1Q96RL1 719 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
CGREF1-208ENST00000467539 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
CGREF1-208ENST00000467539 KAT6AQ92794 2004 aa20.58■□□□□ 0.88
CGREF1-208ENST00000467539 BACH1O14867 736 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 MSH4O15457 936 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 HBP1O60381 514 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 CHRNA1P02708 482 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 FOSL2P15408 326 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 IGBP1P78318 339 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 KRT76Q01546 638 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 Q4G0T1 1027 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 SEPT8Q92599 483 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 RIT2Q99578 217 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 OSBPL7Q9BZF2 842 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 ZNF302Q9NR11 478 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 KCNJ14Q9UNX9 436 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 PCDHA2Q9Y5H9 948 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 PCDHA10Q9Y5I2 948 aa20.57■□□□□ 0.88
CGREF1-208ENST00000467539 MAFBQ9Y5Q3 323 aaPredicted RBP20.57■□□□□ 0.88
CGREF1-208ENST00000467539 CTSHP09668 335 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 FDPSP14324 419 aaKnown RBP20.56■□□□□ 0.88
CGREF1-208ENST00000467539 DEFB103AP81534 67 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
CGREF1-208ENST00000467539 PDXDC2PQ6P474 469 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 KRT25Q7Z3Z0 450 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 CCDC60Q8IWA6 550 aaPredicted RBP20.56■□□□□ 0.88
CGREF1-208ENST00000467539 NECAB1Q8N987 351 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 WASF1Q92558 559 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 PRDM12Q9H4Q4 367 aa20.56■□□□□ 0.88
CGREF1-208ENST00000467539 ORC3Q9UBD5 711 aaPredicted RBP20.56■□□□□ 0.88
CGREF1-208ENST00000467539 TLL1O43897 1013 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 CA3P07451 260 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 PSAPP07602 524 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 ATP4AP20648 1035 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 MGAT3Q09327 533 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 NONOQ15233 471 aaKnown RBP eCLIP20.55■□□□□ 0.88
CGREF1-208ENST00000467539 PPP2R2DQ66LE6 453 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 MOXD1Q6UVY6 613 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 NME8Q8N427 588 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 MAFAQ8NHW3 353 aaPredicted RBP20.55■□□□□ 0.88
CGREF1-208ENST00000467539 ATP8B4Q8TF62 1192 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 SLC5A5Q92911 643 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 MBOAT7Q96N66 472 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 GAS2L1Q99501 681 aaPredicted RBP20.55■□□□□ 0.88
CGREF1-208ENST00000467539 RAD9AQ99638 391 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 ZBED2Q9BTP6 218 aa20.55■□□□□ 0.88
CGREF1-208ENST00000467539 TCEAL9Q9UHQ7 104 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms