RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-203ENST00000467533 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 FRYLO94915 3013 aa11.95□□□□□ -0.5
HDAC3-203ENST00000467533 CEP250Q9BV73 2442 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 FGF18O76093 207 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 CD52P31358 61 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 SP2Q02086 613 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 KCNC3Q14003 757 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 FBXO47Q5MNV8 452 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 ZC3H14Q6PJT7 736 aaKnown RBP11.94□□□□□ -0.5
HDAC3-203ENST00000467533 RUFY4Q6ZNE9 571 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 THNSL1Q8IYQ7 743 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 PDCD2LQ9BRP1 358 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 UBA5Q9GZZ9 404 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 FBXL21Q9UKT6 434 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
HDAC3-203ENST00000467533 CDY2AQ9Y6F7 541 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
HDAC3-203ENST00000467533 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 CHD6Q8TD26 2715 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
HDAC3-203ENST00000467533 FSCN2O14926 492 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 ORC4O43929 436 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 ARP10275 920 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 SCG2P13521 617 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 RFX1P22670 979 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 ADAM17P78536 824 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
HDAC3-203ENST00000467533 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
HDAC3-203ENST00000467533 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 DCLK2Q8N568 766 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-203ENST00000467533 CASP10Q92851 521 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.5
HDAC3-203ENST00000467533 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 FTHL17Q9BXU8 183 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 LRRCC1Q9C099 1032 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
HDAC3-203ENST00000467533 NRCAMQ92823 1304 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 STK25O00506 426 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 TGFB3P10600 412 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 NPR3P17342 541 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 MTHFRP42898 656 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 ITIH3Q06033 890 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 PGM5Q15124 567 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 TSHZ3Q63HK5 1081 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 ZDHHC14Q8IZN3 488 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 SIX5Q8N196 739 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 IL31RAQ8NI17 732 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 CHAMP1Q96JM3 812 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 TCF25Q9BQ70 676 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 ADAM7Q9H2U9 754 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 AGO3Q9H9G7 860 aaKnown RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 ERVK-5Q9HDB9 667 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 DBR1Q9UK59 544 aaKnown RBP11.92□□□□□ -0.5
HDAC3-203ENST00000467533 FANCMQ8IYD8 2048 aa11.92□□□□□ -0.5
HDAC3-203ENST00000467533 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 WEE2P0C1S8 567 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 SDHBP21912 280 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 CCND2P30279 289 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 KIAA0319Q5VV43 1072 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 RTN4RL1Q86UN2 441 aaPredicted RBP11.91□□□□□ -0.5
HDAC3-203ENST00000467533 SIRT2Q8IXJ6 389 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 GPR20Q99678 358 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 BCAS3Q9H6U6 928 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 ANAPC4Q9UJX5 808 aa11.91□□□□□ -0.5
HDAC3-203ENST00000467533 USP24Q9UPU5 2620 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 TBKBP1A7MCY6 615 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 HSD17B4P51659 736 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 MRPS6P82932 125 aaKnown RBP11.9□□□□□ -0.5
HDAC3-203ENST00000467533 SP4Q02446 784 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 PPFIA1Q13136 1202 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 PAK2Q13177 524 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 RARS2Q5T160 578 aaKnown RBP11.9□□□□□ -0.5
HDAC3-203ENST00000467533 METTL7BQ6UX53 244 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 CYFIP1Q7L576 1253 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 VSIG10LQ86VR7 867 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 MRPS27Q92552 414 aaKnown RBP11.9□□□□□ -0.5
HDAC3-203ENST00000467533 TCP11L1Q9NUJ3 509 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 PUF60Q9UHX1 559 aaKnown RBP11.9□□□□□ -0.5
HDAC3-203ENST00000467533 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms