RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 UPP2O95045 317 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 CSPG5O95196 566 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 GH1P01241 217 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 MMP3P08254 477 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 PTPN5P54829 565 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 AKAP17AQ02040 695 aaKnown RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 TRIM29Q14134 588 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 SEPT14Q6ZU15 432 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 NEK9Q8TD19 979 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 RANBP17Q9H2T7 1088 aaKnown RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 MUTYHQ9UIF7 546 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 KCNJ14Q9UNX9 436 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
PRPF3-203ENST00000467514 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
PRPF3-203ENST00000467514 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 LGR5O75473 907 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 CXCL10P02778 98 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 DGKDQ16760 1214 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 RPAINQ86UA6 219 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 DNERQ8NFT8 737 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 GPT2Q8TD30 523 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 USP28Q96RU2 1077 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 CPVLQ9H3G5 476 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
PRPF3-203ENST00000467514 EMSYQ7Z589 1322 aa12.52□□□□□ -0.41
PRPF3-203ENST00000467514 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 STXBP3O00186 592 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 FIBPO43427 364 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 IRS1P35568 1242 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 NASPP49321 788 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-203ENST00000467514 PSEN2P49810 448 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 PTK7Q13308 1070 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-203ENST00000467514 LY6KQ17RY6 165 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 USH1GQ495M9 461 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF3-203ENST00000467514 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 DHX38Q92620 1227 aaKnown RBP12.51□□□□□ -0.41
PRPF3-203ENST00000467514 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-203ENST00000467514 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 HDAC6Q9UBN7 1215 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 GTF2IRD1Q9UHL9 959 aa12.51□□□□□ -0.41
PRPF3-203ENST00000467514 ZNF318Q5VUA4 2279 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 C5orf42Q9H799 3197 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 M0R2N6 131 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 NCK2O43639 380 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 ARIH2O95376 493 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 ZNF286BP0CG31 522 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 XBP1P17861 261 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 CTNNB1P35222 781 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 THPOP40225 353 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 UBE2HP62256 183 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 MFSD10Q14728 455 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 PBXIP1Q96AQ6 731 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 PRRX2Q99811 253 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
PRPF3-203ENST00000467514 TRIOO75962 3097 aa12.49□□□□□ -0.41
PRPF3-203ENST00000467514 MYH7BA7E2Y1 1941 aa12.49□□□□□ -0.41
PRPF3-203ENST00000467514 MYH6P13533 1939 aa12.49□□□□□ -0.41
PRPF3-203ENST00000467514 TCHHQ07283 1943 aa12.49□□□□□ -0.41
PRPF3-203ENST00000467514 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
PRPF3-203ENST00000467514 H3BNC9 293 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms