RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CCDC30Q5VVM6 783 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 NUP54Q7Z3B4 507 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 CCDC186Q7Z3E2 898 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 LRRC71Q8N4P6 559 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 SSH1Q8WYL5 1049 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 SGCDQ92629 289 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 MYLK2Q9H1R3 596 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 TOMM22Q9NS69 142 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ETAA1Q9NY74 926 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 SPATA7Q9P0W8 599 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ZNF215Q9UL58 517 aaPredicted RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 RIMBP3CA6NJZ7 1639 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 RIMBP3BA6NNM3 1639 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ATAD2Q6PL18 1390 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 RIMBP3Q9UFD9 1639 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ATP8B1O43520 1251 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 STAMBPO95630 424 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 EOMESO95936 686 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 MYBL2P10244 700 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ATXN1P54253 815 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 POLR2FP61218 127 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 SMAD4Q13485 552 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 MTMR2Q13614 643 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 OASLQ15646 514 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 KRT24Q2M2I5 525 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 CCDC183Q5T5S1 534 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 CCDC149Q6ZUS6 474 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 PEX5LQ8IYB4 626 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ZGPATQ8N5A5 531 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 SAP130Q9H0E3 1048 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 C2orf40Q9H1Z8 148 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 NSMCE4AQ9NXX6 385 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 GGA3Q9NZ52 723 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 ANGPTL3Q9Y5C1 460 aa8.45□□□□□ -1.06
SPTBN1-204ENST00000467371 FZD9O00144 591 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 NDC80O14777 642 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 NMT2O60551 498 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 THEGLP0DJG4 465 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PCP11498 1178 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 HADHAP40939 763 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 TMPOP42166 694 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 MCTP2Q6DN12 878 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 ALKBH5Q6P6C2 394 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 INTS8Q75QN2 995 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 DZIP1Q86YF9 867 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SMARCE1Q969G3 411 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 ZPBPQ9BS86 351 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 NCOR1P1Q9H4R4 102 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SIRT5Q9NXA8 310 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 H0YC42 278 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SLITRK5O94991 958 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SLC3A2P08195 630 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PF4V1P10720 104 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 USP8P40818 1118 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PEX5P50542 639 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 AP1B1Q10567 949 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CDC16Q13042 620 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SLC10A6Q3KNW5 377 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 ARHGAP29Q52LW3 1261 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 SYDE1Q6ZW31 735 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 TNIP2Q8NFZ5 429 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 C16orf45Q96MC5 204 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 TREX2Q9BQ50 279 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 TCHHQ07283 1943 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 IQGAP3Q86VI3 1631 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 EIF2AK4Q9P2K8 1649 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 EIF3FO00303 357 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PPP1R12BO60237 982 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 RPS6KA5O75582 802 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CDKL5O76039 1030 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 USP1O94782 785 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 FAM153BP0C7A2 387 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 RHCEP18577 417 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 HDCP19113 662 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 HSD17B2P37059 387 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 USP11P51784 963 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 RHDQ02161 417 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CHD1LQ86WJ1 897 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 REXO1L1PQ8IX06 675 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 UTP15Q8TED0 518 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 FATE1Q969F0 183 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 CCDC114Q96M63 670 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 KCND1Q9NSA2 647 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 PPT2Q9UMR5 302 aa8.44□□□□□ -1.06
SPTBN1-204ENST00000467371 TISP43B9A030 160 aa8.43□□□□□ -1.06
SPTBN1-204ENST00000467371 B9A039 149 aa8.43□□□□□ -1.06
SPTBN1-204ENST00000467371 GJB6O95452 261 aa8.43□□□□□ -1.06
SPTBN1-204ENST00000467371 TBX18O95935 607 aa8.43□□□□□ -1.06
SPTBN1-204ENST00000467371 MX1P20591 662 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms