RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ADAM7Q9H2U9 754 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 L2HGDHQ9H9P8 463 aa5.53□□□□□ -1.52
VPS50-209ENST00000467326 FAM90A27PA6NNH2 459 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 B4E1Z4 1266 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS50-209ENST00000467326 PPP1R12AO14974 1030 aaPredicted RBP5.52□□□□□ -1.53
VPS50-209ENST00000467326 NOBOXO60393 691 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 EIF5BO60841 1220 aaKnown RBP5.52□□□□□ -1.53
VPS50-209ENST00000467326 NPTXRO95502 500 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 ENO2P09104 434 aaPredicted RBP5.52□□□□□ -1.53
VPS50-209ENST00000467326 TMEM177Q53S58 311 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 PHF19Q5T6S3 580 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 ABHD17CQ6PCB6 329 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 HOMER1Q86YM7 354 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 NOSTRINQ8IVI9 506 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 SYNPOQ8N3V7 929 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 IGSF22Q8N9C0 903 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 ZCCHC14Q8WYQ9 949 aaKnown RBP5.52□□□□□ -1.53
VPS50-209ENST00000467326 TEPSINQ96N21 525 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 CLUHP3Q96NS8 147 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 FTSJ1Q9UET6 329 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 ZFP69BQ9UJL9 534 aa5.52□□□□□ -1.53
VPS50-209ENST00000467326 MRPL42Q9Y6G3 142 aaKnown RBP5.52□□□□□ -1.53
VPS50-209ENST00000467326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 LOC105371045A0A1W2PR82 267 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 OPA1O60313 960 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 CLASP2O75122 1294 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 DNAJC8O75937 253 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 FBXO21O94952 628 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 CYP1A1P04798 512 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 MLLT6P55198 1093 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 PFKPQ01813 784 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 DBPQ10586 325 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 ZXDCQ2QGD7 858 aaPredicted RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 CPZQ66K79 652 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 MCTP2Q6DN12 878 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 FSTL4Q6MZW2 842 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 ZCCHC8Q6NZY4 707 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 TRMT10BQ6PF06 316 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 OVCH1Q7RTY7 1134 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 DDX53Q86TM3 631 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 JAZF1Q86VZ6 243 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 TXNDC5Q8NBS9 432 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 YTHDC1Q96MU7 727 aaKnown RBP5.51□□□□□ -1.53
VPS50-209ENST00000467326 FANCLQ9NW38 375 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 ARHGAP20Q9P2F6 1191 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 ARHGAP28Q9P2N2 729 aa5.51□□□□□ -1.53
VPS50-209ENST00000467326 SLC12A8A0AV02 714 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 SCDO00767 359 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 HIP1RO75146 1068 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 C4BPAP04003 597 aaKnown RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 ASLP04424 464 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 CDK11BP21127 795 aaKnown RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 GLRBP48167 497 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 PABPC4Q13310 644 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS50-209ENST00000467326 ZNF460Q14592 562 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 TCEA2Q15560 299 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 SMAD2Q15796 467 aaKnown RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 SKOR2Q2VWA4 1001 aaPredicted RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 SPATS1Q496A3 300 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 GGNQ86UU5 652 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 FAM124AQ86V42 546 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 IGDCC4Q8TDY8 1250 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 APPBP2Q92624 585 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 TMEM168Q9H0V1 697 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 SLC39A2Q9NP94 309 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 SAMD15Q9P1V8 674 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 CD2APQ9Y5K6 639 aa5.5□□□□□ -1.53
VPS50-209ENST00000467326 TNPO3Q9Y5L0 923 aaKnown RBP5.5□□□□□ -1.53
VPS50-209ENST00000467326 MROH6A6NGR9 719 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 C9orf118A6NHY6 69 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 M0R2C6 588 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 CDC45O75419 566 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 RFPL3O75679 317 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
VPS50-209ENST00000467326 CHGBP05060 677 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 COL6A1P12109 1028 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 HSP90B1P14625 803 aaKnown RBP5.49□□□□□ -1.53
VPS50-209ENST00000467326 KCNA6P17658 529 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 PTGS1P23219 599 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 AOAHP28039 575 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 CNR2P34972 360 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 IL13P35225 146 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 HERVK_113P62684 666 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 IRF9Q00978 393 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 SEC23AQ15436 765 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 TM4SF20Q53R12 229 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 BORAQ6PGQ7 559 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 STPG3Q8N7X2 389 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 C2orf69Q8N8R5 385 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
VPS50-209ENST00000467326 BOCQ9BWV1 1114 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 KCNH7Q9NS40 1196 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 KCND1Q9NSA2 647 aa5.49□□□□□ -1.53
VPS50-209ENST00000467326 KNG1P01042 644 aa5.48□□□□□ -1.53
VPS50-209ENST00000467326 MMEP08473 750 aa5.48□□□□□ -1.53
VPS50-209ENST00000467326 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
VPS50-209ENST00000467326 TKFCQ3LXA3 575 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms