RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 KRT79Q5XKE5 535 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
CHD1L-205ENST00000467213 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 TMEM109Q9BVC6 243 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 BATF3Q9NR55 127 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 KDM3AQ9Y4C1 1321 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 NHSQ6T4R5 1651 aa17.01■□□□□ 0.31
CHD1L-205ENST00000467213 GBP1P32455 592 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 COASYQ13057 564 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 TRADDQ15628 312 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 PIGWQ7Z7B1 504 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 KLHL7Q8IXQ5 586 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 ANKS4BQ8N8V4 417 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 TPCN2Q8NHX9 752 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 ZNF317Q96PQ6 595 aaPredicted RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 NT5C3AQ9H0P0 336 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 RAB17Q9H0T7 212 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 SLC12A4Q9UP95 1085 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 A0A1B0GUA9 196 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 CCT8L1PA6NM43 557 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 PPP4CP60510 307 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 TMC4Q7Z404 712 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.316e-8■□□□□ 11.2
CHD1L-205ENST00000467213 HVCN1Q96D96 273 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 MOV10L1Q9BXT6 1211 aaKnown RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 CNOT8Q9UFF9 292 aaKnown RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 FRMD5Q7Z6J6 570 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 TEX11Q8IYF3 940 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 CCDC197Q8NCU1 140 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 HES6Q96HZ4 224 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
CHD1L-205ENST00000467213 ADAMTS1Q9UHI8 967 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 NAGPAQ9UK23 515 aa17■□□□□ 0.31
CHD1L-205ENST00000467213 C10orf71Q711Q0 1435 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 FRMD3A2A2Y4 597 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 TRAF5O00463 557 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 FLOT1O75955 427 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 TRIM37O94972 964 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 METTL13Q8N6R0 699 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 N4BP2L2Q92802 583 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 MXD3Q9BW11 206 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 KCTD10Q9H3F6 313 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 EBF2Q9HAK2 575 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 BMP2KQ9NSY1 1161 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 CNOT7Q9UIV1 285 aaKnown RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 NOVA2Q9UNW9 492 aaKnown RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 UTP11Q9Y3A2 253 aaKnown RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 DAAM1Q9Y4D1 1078 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 PITPNM2Q9BZ72 1349 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 FAM187AA6NFU0 413 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 F8W031 263 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 MMP13P45452 471 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 EVX2Q03828 476 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 NAP1L3Q99457 506 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 NEUROG2Q9H2A3 272 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
CHD1L-205ENST00000467213 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
CHD1L-205ENST00000467213 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 CEP104O60308 925 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 ODF2Q5BJF6 829 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 CPLX4Q7Z7G2 160 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 GTPBP10A4D1E9 387 aaKnown RBP16.98■□□□□ 0.31
CHD1L-205ENST00000467213 KRIT1O00522 736 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 TXKP42681 527 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 MAGOHP61326 146 aaKnown RBP16.98■□□□□ 0.31
CHD1L-205ENST00000467213 ELF3P78545 371 aaPredicted RBP16.98■□□□□ 0.31
CHD1L-205ENST00000467213 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 ZNF444Q8N0Y2 327 aaPredicted RBP16.98■□□□□ 0.31
CHD1L-205ENST00000467213 MAGOHBQ96A72 148 aaKnown RBP16.98■□□□□ 0.31
CHD1L-205ENST00000467213 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
CHD1L-205ENST00000467213 PTK2Q05397 1052 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 BTNL9Q6UXG8 535 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 UBLCP1Q8WVY7 318 aaPredicted RBP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 NIP7Q9Y221 180 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms