RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SEC23AQ15436 765 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 NFE2Q16621 373 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 INAVAQ3KP66 663 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 OLFML2BQ68BL8 750 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 E2F7Q96AV8 911 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 C16orf92Q96LL3 132 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 CAMKK2Q96RR4 588 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 NGRNQ9NPE2 291 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 KCNG1Q9UIX4 513 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 SIT1Q9Y3P8 196 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 TELO2Q9Y4R8 837 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
CDC42BPA-211ENST00000466538 SHTN1A0MZ66 631 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 FOXP2O15409 715 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 CFBP00751 764 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 LTFP02788 710 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 KRT85P78386 507 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 PRR5P85299 388 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 PAN2Q504Q3 1202 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 ARTNQ5T4W7 220 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 CBLL1Q75N03 491 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 IRF2BP1Q8IU81 584 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 RBM12BQ8IXT5 1001 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 ARRDC4Q8NCT1 418 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 GEMIN8Q9NWZ8 242 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 KLHL14Q9P2G3 628 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 ASB1Q9Y576 335 aa5.87□□□□□ -1.47
CDC42BPA-211ENST00000466538 TNKSO95271 1327 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 NUDT19A8MXV4 375 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 ACOT7O00154 380 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 GLI1P08151 1106 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 PTX3P26022 381 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 GALK1P51570 392 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 HSP90AB2PQ58FF8 381 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 ADGRF1Q5T601 910 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 FYB2Q5VWT5 728 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 FSTL4Q6MZW2 842 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZC3H14Q6PJT7 736 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 RPTNQ6XPR3 784 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZBTB46Q86UZ6 589 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 TOE1Q96GM8 510 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 ACAP3Q96P50 834 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 YIPF4Q9BSR8 244 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 PCGF6Q9BYE7 350 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 VTA1Q9NP79 307 aa5.86□□□□□ -1.47
CDC42BPA-211ENST00000466538 PRAMEF25A6NGN4 478 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 TRIM75PA6NK02 468 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 GOLGA8AA7E2F4 631 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 GOLGA8BA8MQT2 603 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 PDE6BP35913 854 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 CATSPEREQ5SY80 951 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 FMNL3Q8IVF7 1028 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 FAM126BQ8IXS8 530 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 LMBR1Q8WVP7 490 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 FUBP3Q96I24 572 aaKnown RBP eCLIP5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 GBP4Q96PP9 640 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 RXFP1Q9HBX9 757 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 TOPORSQ9NS56 1045 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 C14orf119Q9NWQ9 140 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 DTLQ9NZJ0 730 aa5.85□□□□□ -1.47
CDC42BPA-211ENST00000466538 AKAP10O43572 662 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 LRG1P02750 347 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 RBP3P10745 1247 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 CCND1P24385 295 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 RAB27AP51159 221 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 GRIN1Q05586 938 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 DBPQ10586 325 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 PPP2R5AQ15172 486 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 TIGD7Q6NT04 549 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 ESRP1Q6NXG1 681 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 ETV3LQ6ZN32 361 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 AMIGO3Q86WK7 504 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 PHYKPLQ8IUZ5 450 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 CPA5Q8WXQ8 436 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 FAXDC2Q96IV6 333 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 SMAD5Q99717 465 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 WNT8AQ9H1J5 351 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 ZNF552Q9H707 407 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 PCDH18Q9HCL0 1135 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 TCF7L1Q9HCS4 588 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 AASDHPPTQ9NRN7 309 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 MRFAP1Q9Y605 127 aa5.84□□□□□ -1.47
CDC42BPA-211ENST00000466538 SCO2A0A1W2PP80 73 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 RASSF10A6NK89 507 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 ENO2P09104 434 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 AOAHP28039 575 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 SCAND1P57086 179 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 NKX3-2P78367 333 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 PIN1Q13526 163 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 KCNMB1Q16558 191 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 PTPN21Q16825 1174 aa5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 PLEKHN1Q494U1 663 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-211ENST00000466538 PGM2L1Q6PCE3 622 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms