RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PFKFB2O60825 505 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 DUSP11O75319 330 aaKnown RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 DEXIO95424 95 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 SNAI1O95863 264 aaPredicted RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 GOLGA8HP0CJ92 632 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 PDIA3P30101 505 aaKnown RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 AK2P54819 239 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 ERVK-21P61565 698 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 HMGN5P82970 282 aaKnown RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 GHRHRQ02643 423 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 APOBRQ0VD83 1088 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 TOB2Q14106 344 aaPredicted RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 ACAP1Q15027 740 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 GALNT17Q6IS24 598 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 ZNF687Q8N1G0 1237 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 DNERQ8NFT8 737 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 PABPC5Q96DU9 382 aaKnown RBP7.95□□□□□ -1.14
CLDN4-204ENST00000466411 DDX11Q96FC9 970 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 TRERF1Q96PN7 1200 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 HS3ST6Q96QI5 342 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 MMP19Q99542 508 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 LRRC2Q9BYS8 371 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 JMJD4Q9H9V9 463 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 SH3GLB2Q9NR46 395 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 RNF146Q9NTX7 359 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 KIAA1468Q9P260 1216 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 PCDHA1Q9Y5I3 950 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 OTOGLQ3ZCN5 2332 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 ATG2AQ2TAZ0 1938 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 MCM3APO60318 1980 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ASB14A6NK59 587 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 PRPF3O43395 683 aaKnown RBP7.94□□□□□ -1.14
CLDN4-204ENST00000466411 B4GALT4O60513 344 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 STAM2O75886 525 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 PFKMP08237 780 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ALAS1P13196 640 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 CALML3P27482 149 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 GNA11P29992 359 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 SLC16A2P36021 539 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 GJA9P57773 515 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 SSRP1Q08945 709 aaKnown RBP7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ST3GAL2Q16842 350 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 QRICH1Q2TAL8 776 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 STAG2Q8N3U4 1231 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 PCSK9Q8NBP7 692 aaKnown RBP7.94□□□□□ -1.14
CLDN4-204ENST00000466411 GTF3C6Q969F1 213 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 TRPV6Q9H1D0 765 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 TMEM134Q9H6X4 195 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 RAVER2Q9HCJ3 691 aaKnown RBP7.94□□□□□ -1.14
CLDN4-204ENST00000466411 BRMS1Q9HCU9 246 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 BRPF3Q9ULD4 1205 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.94□□□□□ -1.14
CLDN4-204ENST00000466411 CNTNAP5Q8WYK1 1306 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ASPMQ8IZT6 3477 aa7.94□□□□□ -1.14
CLDN4-204ENST00000466411 ESYT2A0FGR8 921 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 FOSP01100 380 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-204ENST00000466411 SCG2P13521 617 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 TRIM29Q14134 588 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 PUM1Q14671 1186 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLDN4-204ENST00000466411 PFKFB3Q16875 520 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-204ENST00000466411 CTC1Q2NKJ3 1217 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 TTBK2Q6IQ55 1244 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 XRRA1Q6P2D8 792 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 RNF207Q6ZRF8 634 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 HOMER1Q86YM7 354 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 NKD2Q969F2 451 aaPredicted RBP7.93□□□□□ -1.14
CLDN4-204ENST00000466411 TCEANC2Q96MN5 208 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 PIGSQ96S52 555 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 IWS1Q96ST2 819 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 MYL10Q9BUA6 226 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 UBA5Q9GZZ9 404 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 C6orf50Q9HD87 102 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 BARHL2Q9NY43 387 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 FAM50BQ9Y247 325 aa7.93□□□□□ -1.14
CLDN4-204ENST00000466411 TRIP12Q14669 1992 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 MYO10Q9HD67 2058 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 PTPDC1A2A3K4 754 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 LINC01553A4QN01 128 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 SPDYE3A6NKU9 549 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 KIF28PB7ZC32 967 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 GCOM1H8Y6P7 765 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 MBTPS2O43462 519 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 PLEKHA8P1O95397 391 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 PGK2P07205 417 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 POLR2MP0CAP2 368 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 CPA1P15085 419 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 PDCP20941 246 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 HSD17B4P51659 736 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 NAPAP54920 295 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 DLX2Q07687 328 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 SIGLEC14Q08ET2 396 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 AP3B2Q13367 1082 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 CBX2Q14781 532 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 GPNMBQ14956 572 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 USH1GQ495M9 461 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 KCNV1Q6PIU1 500 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms