RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PXMP2Q9NR77 195 aa20.24■□□□□ 0.83
COL9A3-205ENST00000466192 DNAI1Q9UI46 699 aa20.24■□□□□ 0.83
COL9A3-205ENST00000466192 A0A1W2PQC6 194 aa20.24■□□□□ 0.83
COL9A3-205ENST00000466192 DNM2P50570 870 aa20.24■□□□□ 0.83
COL9A3-205ENST00000466192 ITGB3BPQ13352 177 aaPredicted RBP20.24■□□□□ 0.83
COL9A3-205ENST00000466192 PDCD2LQ9BRP1 358 aa20.24■□□□□ 0.83
COL9A3-205ENST00000466192 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
COL9A3-205ENST00000466192 RSPH10B2B2RC85 870 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 TUBB4AP04350 444 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 RSPH10BP0C881 870 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 KRT9P35527 623 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 RINT1Q6NUQ1 792 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 MTERF4Q7Z6M4 381 aaKnown RBP20.23■□□□□ 0.83
COL9A3-205ENST00000466192 TSG101Q99816 390 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 WDR81Q562E7 1941 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 LOC285556D6RIA3 1793 aa20.23■□□□□ 0.83
COL9A3-205ENST00000466192 LCTP09848 1927 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 SPDYE16A6NNV3 312 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-205ENST00000466192 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-205ENST00000466192 MUTP22033 750 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 CASP5P51878 434 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 MTMR1Q13613 665 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 SFR1Q86XK3 245 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 NELFCDQ8IXH7 590 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
COL9A3-205ENST00000466192 NOC4LQ9BVI4 516 aaKnown RBP20.22■□□□□ 0.83
COL9A3-205ENST00000466192 BCAS3Q9H6U6 928 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 POLD4Q9HCU8 107 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 TTC26A0AVF1 554 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 PPP1R12BO60237 982 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-205ENST00000466192 CCDC175P0C221 793 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 TBC1D8BQ0IIM8 1120 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 ARHGEF16Q5VV41 709 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 KCTD10Q9H3F6 313 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 HOXC10Q9NYD6 342 aa20.22■□□□□ 0.83
COL9A3-205ENST00000466192 GOLGA6L9A6NEM1 432 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 FGFR1OPO95684 399 aaKnown RBP20.21■□□□□ 0.83
COL9A3-205ENST00000466192 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 LXNQ9BS40 222 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 TEX13BQ9BXU2 312 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 FECHP22830 423 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 TREML2Q5T2D2 321 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 C1orf186Q6ZWK4 172 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 MIER3Q7Z3K6 550 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 MRPL44Q9H9J2 332 aaKnown RBP20.21■□□□□ 0.83
COL9A3-205ENST00000466192 CSADQ9Y600 493 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 ADGRG1Q9Y653 693 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 MYPNQ86TC9 1320 aa20.21■□□□□ 0.83
COL9A3-205ENST00000466192 DOCK5Q9H7D0 1870 aa20.2■□□□□ 0.82
COL9A3-205ENST00000466192 FANCGO15287 622 aa20.2■□□□□ 0.82
COL9A3-205ENST00000466192 ERVK-24P63145 666 aa20.2■□□□□ 0.82
COL9A3-205ENST00000466192 FKBP3Q00688 224 aaKnown RBP20.2■□□□□ 0.82
COL9A3-205ENST00000466192 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-205ENST00000466192 TRAF5O00463 557 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 ERCC3P19447 782 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 KLK7P49862 253 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 SYCP1Q15431 976 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 TMTC1Q8IUR5 882 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-205ENST00000466192 LUC7L2Q9Y383 392 aaKnown RBP20.19■□□□□ 0.82
COL9A3-205ENST00000466192 PHLPP2Q6ZVD8 1323 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 A0A0G2JMZ2 1700 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 ATP9AO75110 1047 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 TBCAO75347 108 aaKnown RBP20.19■□□□□ 0.82
COL9A3-205ENST00000466192 KIF20AO95235 890 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 HOXD13P35453 343 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 PLS1Q14651 629 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 NAA30Q147X3 362 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-205ENST00000466192 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 CYP26C1Q6V0L0 522 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 NEK9Q8TD19 979 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 PRDM4Q9UKN5 801 aa20.19■□□□□ 0.82
COL9A3-205ENST00000466192 ZNF215Q9UL58 517 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-205ENST00000466192 RASSF10A6NK89 507 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 MYBP10242 640 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 TRIM21P19474 475 aaKnown RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 IREB2P48200 963 aaKnown RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 GNG11P61952 73 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 MAN2A1Q16706 1144 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 VWA3BQ502W6 1294 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 VSIG10LQ86VR7 867 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 PCMTD1Q96MG8 357 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 ACAD9Q9H845 621 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 LZTFL1Q9NQ48 299 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 A1CFQ9NQ94 594 aaKnown RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 TBC1D22BQ9NU19 505 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 CAPN11Q9UMQ6 739 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 COL4A3BPQ9Y5P4 624 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 A0A0U1RQJ8 604 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 TESPA1A2RU30 521 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 NR3C2P08235 984 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 USP50Q70EL3 339 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-205ENST00000466192 MOB2Q70IA6 237 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 OR8K1Q8NGG5 319 aa20.18■□□□□ 0.82
COL9A3-205ENST00000466192 ATRIPQ8WXE1 791 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms