RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 CHRNA1P02708 482 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 ZNF76P36508 570 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 IGBP1P78318 339 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 KRT40Q6A162 431 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 REXO1Q8N1G1 1221 aaKnown RBP16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 ZBED2Q9BTP6 218 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 GLT8D2Q9H1C3 349 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 CYP46A1Q9Y6A2 500 aa16.02■□□□□ 0.16
CACNA1C-224ENST00000465934 MBLAC1A4D2B0 266 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 CAND2O75155 1236 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 INSRRP14616 1297 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 IFNAR1P17181 557 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 AKAP17AQ02040 695 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 FAM26DQ5JW98 314 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 TRAPPC12Q8WVT3 735 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 RNF26Q9BY78 433 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 C6orf50Q9HD87 102 aa16.01■□□□□ 0.15
CACNA1C-224ENST00000465934 CUL9Q8IWT3 2517 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 DHX15O43143 795 aaKnown RBP16■□□□□ 0.15
CACNA1C-224ENST00000465934 EFCAB14O75071 495 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 CYP3A4P08684 503 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 MGAT3Q09327 533 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 STK3Q13188 491 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 PLCB4Q15147 1175 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 NIPA1Q7RTP0 329 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 MYOCDQ8IZQ8 938 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 CCDC12Q8WUD4 166 aaPredicted RBP16■□□□□ 0.15
CACNA1C-224ENST00000465934 DNAJB3Q8WWF6 145 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 SEPT8Q92599 483 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 RAD9AQ99638 391 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 AZI2Q9H6S1 392 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 MTUS1Q9ULD2 1270 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 TRPC6Q9Y210 931 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 PTPRSQ13332 1948 aa16■□□□□ 0.15
CACNA1C-224ENST00000465934 EDIL3O43854 480 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 DTNBO60941 627 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 GHRP10912 638 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 STAT5BP51692 787 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 RPAINQ86UA6 219 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 IFIH1Q9BYX4 1025 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 MTCH2Q9Y6C9 303 aa15.99■□□□□ 0.15
CACNA1C-224ENST00000465934 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 LINC01553A4QN01 128 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 LPXNO60711 386 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 ATG7O95352 703 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 AMHP03971 560 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 GNA11P29992 359 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 GRB10Q13322 594 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 LPIN1Q14693 890 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 PRR16Q569H4 304 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 ABHD15Q6UXT9 468 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 PLPPR4Q7Z2D5 763 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 GDPD5Q8WTR4 605 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 LENG9Q96B70 501 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 AIFM3Q96NN9 605 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
CACNA1C-224ENST00000465934 MUC3AQ02505 3323 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 BACH1O14867 736 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 SSRP1Q08945 709 aaKnown RBP15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 TMEM62Q0P6H9 643 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 CCDC148Q8NFR7 591 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 ZNF274Q96GC6 653 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 ZNF577Q9BSK1 485 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 CDY2AQ9Y6F7 541 aa15.97■□□□□ 0.15
CACNA1C-224ENST00000465934 POTEB3A0JP26 581 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 UPP2O95045 317 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 ATP4AP20648 1035 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 CIITAP33076 1130 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 NLRP5P59047 1200 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 MRPS6P82932 125 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 HTRA4P83105 476 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 SETQ01105 290 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 FBXO47Q5MNV8 452 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 POTEBQ6S5H4 581 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 RSPH3Q86UC2 560 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 TRIM22Q8IYM9 498 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 C17orf80Q9BSJ5 609 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 AGO3Q9H9G7 860 aaKnown RBP15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 SUGCTQ9HAC7 445 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 THEGQ9P2T0 379 aa15.96■□□□□ 0.15
CACNA1C-224ENST00000465934 CPLX1O14810 134 aa15.95■□□□□ 0.14
CACNA1C-224ENST00000465934 POU3F3P20264 500 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-224ENST00000465934 ERVK-21P61565 698 aa15.95■□□□□ 0.14
CACNA1C-224ENST00000465934 SCRN1Q12765 414 aa15.95■□□□□ 0.14
CACNA1C-224ENST00000465934 NPY5RQ15761 445 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms