RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 PYGMP11217 842 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 RBL2Q08999 1139 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 DBPQ10586 325 aaPredicted RBP8.42□□□□□ -1.06
SSB-207ENST00000465871 ZC3H12BQ5HYM0 836 aaKnown RBP8.42□□□□□ -1.06
SSB-207ENST00000465871 BTBD8Q5XKL5 378 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 REXO1L1PQ8IX06 675 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 CBLCQ9ULV8 474 aa8.42□□□□□ -1.06
SSB-207ENST00000465871 H0Y858 1186 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 MAN2B1O00754 1011 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 IL18BPO95998 194 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 PDE6AP16499 860 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 ST5P78524 1137 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 PUM1Q14671 1186 aaKnown RBP eCLIP8.41□□□□□ -1.06
SSB-207ENST00000465871 FAM47CQ5HY64 1035 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 SLFN13Q68D06 897 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 C16orf59Q7L2K0 433 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
SSB-207ENST00000465871 KISS1RQ969F8 398 aaPredicted RBP8.41□□□□□ -1.06
SSB-207ENST00000465871 TACO1Q9BSH4 297 aaKnown RBP8.41□□□□□ -1.06
SSB-207ENST00000465871 SLC39A2Q9NP94 309 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 JADE2Q9NQC1 790 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 RIC8BQ9NVN3 520 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 ST6GALNAC2Q9UJ37 374 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 ATP23Q9Y6H3 246 aa8.41□□□□□ -1.06
SSB-207ENST00000465871 FAM221BA6H8Z2 402 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 FAM90A27PA6NNH2 459 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 C1QTNF3-AMACRE9PGA6 284 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 GSTA4O15217 222 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 GPR42O15529 346 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 AMY2AP04746 511 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 AMY2BP19961 511 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 GJA4P35212 333 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 PTRH1Q86Y79 214 aaKnown RBP8.4□□□□□ -1.06
SSB-207ENST00000465871 DVL3Q92997 716 aaPredicted RBP8.4□□□□□ -1.06
SSB-207ENST00000465871 KATNBL1Q9H079 304 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 PCDHA9Q9Y5H5 950 aa8.4□□□□□ -1.06
SSB-207ENST00000465871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
SSB-207ENST00000465871 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 CRTAMO95727 393 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 SRGAP2CP0DJJ0 459 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 CSF2RBP32927 897 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 CRY1Q16526 586 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 OSTM1Q86WC4 334 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 ZC3H7AQ8IWR0 971 aaKnown RBP8.39□□□□□ -1.07
SSB-207ENST00000465871 SLC4A7Q9Y6M7 1214 aa8.39□□□□□ -1.07
SSB-207ENST00000465871 CCDC66A2RUB6 948 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 KRT15P19012 456 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 JAM2P57087 298 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 ICAM4Q14773 271 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 GPR155Q7Z3F1 870 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 IFNL2Q8IZJ0 200 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 DNERQ8NFT8 737 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 PTPN18Q99952 460 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 ARHGAP28Q9P2N2 729 aa8.38□□□□□ -1.07
SSB-207ENST00000465871 EFCAB14O75071 495 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 CNOT4O95628 575 aaKnown RBP8.37□□□□□ -1.07
SSB-207ENST00000465871 GSTCDQ8NEC7 633 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 MKL1Q969V6 931 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 SRPK1Q96SB4 655 aaKnown RBP8.37□□□□□ -1.07
SSB-207ENST00000465871 SMURF1Q9HCE7 757 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 CD248Q9HCU0 757 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 NDOR1Q9UHB4 597 aa8.37□□□□□ -1.07
SSB-207ENST00000465871 CUTAO60888 179 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 CLASP2O75122 1294 aaKnown RBP8.36□□□□□ -1.07
SSB-207ENST00000465871 TNFRSF1AP19438 455 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 DNM2P50570 870 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 TRIM61Q5EBN2 209 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 DPP8Q6V1X1 898 aaPredicted RBP8.36□□□□□ -1.07
SSB-207ENST00000465871 DNAJC7Q99615 494 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 SEC61A2Q9H9S3 476 aa8.36□□□□□ -1.07
SSB-207ENST00000465871 PRAMEF25A6NGN4 478 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 PATE3B3GLJ2 98 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 C4BPAP04003 597 aaKnown RBP8.35□□□□□ -1.07
SSB-207ENST00000465871 APPP05067 770 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 PTGS1P23219 599 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 AOAHP28039 575 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 POLD1P28340 1107 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 LACTBP83111 547 aaPredicted RBP8.35□□□□□ -1.07
SSB-207ENST00000465871 USP10Q14694 798 aaKnown RBP8.35□□□□□ -1.07
SSB-207ENST00000465871 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
SSB-207ENST00000465871 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 SFMBT1Q9UHJ3 866 aa8.35□□□□□ -1.07
SSB-207ENST00000465871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.34□□□□□ -1.07
SSB-207ENST00000465871 MATN3O15232 486 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 HERVK_113P62684 666 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 TOP3AQ13472 1001 aaPredicted RBP8.34□□□□□ -1.07
SSB-207ENST00000465871 CISD2Q8N5K1 135 aaKnown RBP8.34□□□□□ -1.07
SSB-207ENST00000465871 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 CDK5RAP1Q96SZ6 601 aaKnown RBP8.34□□□□□ -1.07
SSB-207ENST00000465871 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 KLC2Q9H0B6 622 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 INCENPQ9NQS7 918 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 TSC22D4Q9Y3Q8 395 aa8.34□□□□□ -1.07
SSB-207ENST00000465871 KCNK3O14649 394 aa8.33□□□□□ -1.08
SSB-207ENST00000465871 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms