RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 FPR2P25090 351 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 CNNM4Q6P4Q7 775 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 MAMDC2Q7Z304 686 aaPredicted RBP7□□□□□ -1.29
CACNA1C-223ENST00000465278 LZTR1Q8N653 840 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 GSTCDQ8NEC7 633 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 NINJ1Q92982 152 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 SHISA4Q96DD7 197 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 TRMT2BQ96GJ1 504 aaKnown RBP7□□□□□ -1.29
CACNA1C-223ENST00000465278 KIRREL1Q96J84 757 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 RNF32Q9H0A6 362 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 TRIM39Q9HCM9 518 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 CLDND1Q9NY35 253 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 FBLN5Q9UBX5 448 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 NRXN3Q9Y4C0 1643 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 ZFYVE9O95405 1425 aa7□□□□□ -1.29
CACNA1C-223ENST00000465278 EFCAB14O75071 495 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 RFPL3O75679 317 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 FXR1P51114 621 aaKnown RBP eCLIP6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 LBX1P52954 281 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 TRIM61Q5EBN2 209 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 BICRALQ6AI39 1079 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 NLRX1Q86UT6 975 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 NIM1KQ8IY84 436 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 PLEKHO2Q8TD55 490 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 MTA3Q9BTC8 594 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 RXFP1Q9HBX9 757 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 PDLIM7Q9NR12 457 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 ADAMTS13Q76LX8 1427 aa6.99□□□□□ -1.29
CACNA1C-223ENST00000465278 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 CBLL1Q75N03 491 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 NLRP10Q86W26 655 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 ZC3H7AQ8IWR0 971 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 LILRA2Q8N149 483 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 PCDH19Q8TAB3 1148 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 ZFYVE21Q9BQ24 234 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 IPPKQ9H8X2 491 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 NMRK2Q9NPI5 230 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 TNPO3Q9Y5L0 923 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 PTPRUQ92729 1446 aa6.98□□□□□ -1.29
CACNA1C-223ENST00000465278 LMTK2Q8IWU2 1503 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 DUOX2Q9NRD8 1548 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 TCRBV16S1A1N1A0A5B0 115 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 OPA1O60313 960 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 SOD2P04179 222 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 NTRK1P04629 796 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 COL6A2P12110 1019 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 MYCLP1P12525 358 aaPredicted RBP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 PNLIPP16233 465 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 GTF2A2P52657 109 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 PAK1Q13153 545 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 ZNF460Q14592 562 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 SNX17Q15036 470 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 ARHGAP31Q2M1Z3 1444 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 ATG4DQ86TL0 474 aaPredicted RBP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 FLAD1Q8NFF5 587 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 SNX27Q96L92 541 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 PARP4Q9UKK3 1724 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 LAMB4A4D0S4 1761 aa6.97□□□□□ -1.29
CACNA1C-223ENST00000465278 PLSCR1O15162 318 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 MASP1P48740 699 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 KIZQ2M2Z5 673 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 C16orf71Q8IYS4 520 aaPredicted RBP6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 CATSPERZQ9NTU4 200 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 COQ6Q9Y2Z9 468 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 SIT1Q9Y3P8 196 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
CACNA1C-223ENST00000465278 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 FAM47E-STBD1D6RA91 191 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 PYGMP11217 842 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 PDE6BP35913 854 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 ARL4AP40617 200 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 DNM2P50570 870 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 NEK4P51957 841 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 SLC15A2Q16348 729 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 KCNMB1Q16558 191 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 ADGRF1Q5T601 910 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 ABHD17CQ6PCB6 329 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 UBR7Q8N806 425 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 CRTAC1Q9NQ79 661 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 PLAAQ9Y263 795 aa6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 YBX2Q9Y2T7 364 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-223ENST00000465278 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 ANKRD62A6NC57 917 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 NUDT19A8MXV4 375 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 H7BY64 318 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 ARVCFO00192 962 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 ASLP04424 464 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 APPP05067 770 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 JMJD7P0C870 316 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 HSPA8P11142 646 aaKnown RBP6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 GRK2P25098 689 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 GRK3P35626 688 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 CORO7P57737 925 aa6.94□□□□□ -1.3
CACNA1C-223ENST00000465278 TM4SF20Q53R12 229 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms