RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	SLC35G1	Q2M3R5	365 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	NAALADL2	Q58DX5	795 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	FBXO47	Q5MNV8	452 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	CMTR2	Q8IYT2	770 aa	Known RBP	13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	FBXL6	Q8N531	539 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	SPPL3	Q8TCT6	385 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	POF1B	Q8WVV4	589 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	DSCC1	Q9BVC3	393 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	LNPK	Q9C0E8	428 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	RIOX1	Q9H6W3	641 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	TUBE1	Q9UJT0	475 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	USP15	Q9Y4E8	981 aa	Predicted RBP	13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	CDY2A	Q9Y6F7	541 aa		13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.89	□□□□□ -0.19
TRA2B-208	ENST00000465245	GFRA3	O60609	400 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	CD52	P31358	61 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	CBX2	Q14781	532 aa	Predicted RBP	13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	GRM4	Q14833	912 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	GRIK4	Q16099	956 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	PAN2	Q504Q3	1202 aa	Known RBP	13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	RBM23	Q86U06	439 aa	Known RBP	13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	NPAS4	Q8IUM7	802 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	KLHL23	Q8NBE8	558 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	DNAJB3	Q8WWF6	145 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	LINC01599	Q8WXQ3	324 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	SENP7	Q9BQF6	1050 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	PHF7	Q9BWX1	381 aa	Predicted RBP	13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	FAM86C1	Q9NVL1	165 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	SPTBN4	Q9H254	2564 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	PLXNA3	P51805	1871 aa		13.88	□□□□□ -0.19
TRA2B-208	ENST00000465245	PNMA6F	A0A0J9YX94	578 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	CYTH3	O43739	400 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	GLP2R	O95838	553 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	MARK3	P27448	753 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	MRPS6	P82932	125 aa	Known RBP	13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	SIGLEC14	Q08ET2	396 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	PCNX4	Q63HM2	1172 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	CYB5R4	Q7L1T6	521 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	NLRX1	Q86UT6	975 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	RPGRIP1	Q96KN7	1286 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	AGO3	Q9H9G7	860 aa	Known RBP	13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	ERAP1	Q9NZ08	941 aa		13.87	□□□□□ -0.19
TRA2B-208	ENST00000465245	HIP1	O00291	1037 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	STAG3L1	P0CL83	205 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	VCP	P55072	806 aa	Known RBP	13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	IGBP1	P78318	339 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	HDAC1	Q13547	482 aa	Predicted RBP	13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	SMARCC2	Q8TAQ2	1214 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	PIBF1	Q8WXW3	757 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	GLG1	Q92896	1179 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	CUL5	Q93034	780 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	FTHL17	Q9BXU8	183 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	PCDHGC5	Q9Y5F6	944 aa		13.86	□□□□□ -0.19
TRA2B-208	ENST00000465245	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	RPLP2	P05387	115 aa	Known RBP	13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	SCG2	P13521	617 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	MARCH8	Q5T0T0	291 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	IER5	Q5VY09	327 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	XRRA1	Q6P2D8	792 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	USP17L6P	Q6QN14	398 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	CRIPAK	Q8N1N5	446 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	ATOH1	Q92858	354 aa	Predicted RBP	13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	ASIC4	Q96FT7	647 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	IRF2BPL	Q9H1B7	796 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	TLE6	Q9H808	572 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	TRPV2	Q9Y5S1	764 aa		13.85	□□□□□ -0.19
TRA2B-208	ENST00000465245	GSTTP1	A0A1W2PQM5	241 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	ERICH2	A1L162	156 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245		M0QZ92	97 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	ATP9A	O75110	1047 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	PPFIA3	O75145	1194 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	KCNA2	P16389	499 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	IBSP	P21815	317 aa	Predicted RBP	13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	GATM	P50440	423 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	TRDN	Q13061	729 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	PAK2	Q13177	524 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	SPOUT1	Q5T280	376 aa	Known RBP	13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	MICAL1	Q8TDZ2	1067 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	SEPT1	Q8WYJ6	367 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	GPRASP2	Q96D09	838 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	ZBTB10	Q96DT7	871 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	SMARCAD1	Q9H4L7	1026 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	LRFN2	Q9ULH4	789 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	PADI3	Q9ULW8	664 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	SQOR	Q9Y6N5	450 aa		13.84	□□□□□ -0.19
TRA2B-208	ENST00000465245	FSD2	A1L4K1	749 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	IFIT3	O14879	490 aa	Known RBP	13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	PER2	O15055	1255 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	ATF7	P17544	494 aa	Predicted RBP	13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	AVPR2	P30518	371 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	RBM10	P98175	930 aa	Known RBP	13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	UBE3A	Q05086	875 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	TMEM62	Q0P6H9	643 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	PTPN21	Q16825	1174 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	ZBTB33	Q86T24	672 aa		13.83	□□□□□ -0.2
TRA2B-208	ENST00000465245	CDHR1	Q96JP9	859 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms