RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PLA2G4DQ86XP0 818 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 CCDC148Q8NFR7 591 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 CRYGNQ8WXF5 182 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 TUBE1Q9UJT0 475 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 TAF2Q6P1X5 1199 aa29.45■■■□□ 2.31
U2AF1-206ENST00000464750 SEPT8Q92599 483 aa29.45■■■□□ 2.31
U2AF1-206ENST00000464750 OSBPL7Q9BZF2 842 aa29.45■■■□□ 2.31
U2AF1-206ENST00000464750 VPS54Q9P1Q0 977 aa29.45■■■□□ 2.31
U2AF1-206ENST00000464750 LCHNA4D1U4 455 aa29.44■■■□□ 2.3
U2AF1-206ENST00000464750 DDX39AO00148 427 aaKnown RBP29.44■■■□□ 2.3
U2AF1-206ENST00000464750 GJB5O95377 273 aa29.44■■■□□ 2.3
U2AF1-206ENST00000464750 CYP3A4P08684 503 aa29.44■■■□□ 2.3
U2AF1-206ENST00000464750 MKRN4PQ13434 485 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-206ENST00000464750 FAM26DQ5JW98 314 aa29.44■■■□□ 2.3
U2AF1-206ENST00000464750 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.44■■■□□ 2.3
U2AF1-206ENST00000464750 RASGRP4Q8TDF6 673 aa29.44■■■□□ 2.3
U2AF1-206ENST00000464750 IGLV3-22A0A075B6J6 115 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 MBLAC1A4D2B0 266 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-206ENST00000464750 IGBP1P78318 339 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 FAM117BQ6P1L5 589 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 BICD2Q8TD16 824 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 ARNTL2Q8WYA1 636 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 LARP6Q9BRS8 491 aaKnown RBP29.43■■■□□ 2.3
U2AF1-206ENST00000464750 TRPC6Q9Y210 931 aa29.43■■■□□ 2.3
U2AF1-206ENST00000464750 EPOPA6NHQ4 379 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 RFXAPO00287 272 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 AMHP03971 560 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 MARCH8Q5T0T0 291 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 RPAINQ86UA6 219 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 TRIM22Q8IYM9 498 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 ZNF274Q96GC6 653 aaPredicted RBP29.42■■■□□ 2.3
U2AF1-206ENST00000464750 PDRG1Q9NUG6 133 aa29.42■■■□□ 2.3
U2AF1-206ENST00000464750 CCNE2O96020 404 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 INSRRP14616 1297 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 STAT5BP51692 787 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 SETQ01105 290 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-206ENST00000464750 PLCB4Q15147 1175 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 CCDC85BQ15834 202 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-206ENST00000464750 PLPPR4Q7Z2D5 763 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 SPRED2Q7Z698 418 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 RSPH3Q86UC2 560 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 MYOCDQ8IZQ8 938 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 UIMC1Q96RL1 719 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 RAD9AQ99638 391 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 PRDM6Q9NQX0 595 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 TRANK1O15050 2925 aa29.41■■■□□ 2.3
U2AF1-206ENST00000464750 PRRC2BQ5JSZ5 2229 aaKnown RBP29.4■■■□□ 2.3
U2AF1-206ENST00000464750 RRN3P2A6NIE6 340 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 CPLX1O14810 134 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 ATG7O95352 703 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 CHRNA1P02708 482 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 SSRP1Q08945 709 aaKnown RBP29.4■■■□□ 2.3
U2AF1-206ENST00000464750 MGAT3Q09327 533 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 STK3Q13188 491 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 TNPO1Q92973 898 aaKnown RBP29.4■■■□□ 2.3
U2AF1-206ENST00000464750 ZBTB10Q96DT7 871 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 COL25A1Q9BXS0 654 aaPredicted RBP29.4■■■□□ 2.3
U2AF1-206ENST00000464750 SH3GLB2Q9NR46 395 aa29.4■■■□□ 2.3
U2AF1-206ENST00000464750 MYH9P35579 1960 aaKnown RBP29.39■■■□□ 2.3
U2AF1-206ENST00000464750 IPO5O00410 1097 aaKnown RBP29.39■■■□□ 2.3
U2AF1-206ENST00000464750 MICALL1Q8N3F8 863 aa29.39■■■□□ 2.3
U2AF1-206ENST00000464750 DNAJB3Q8WWF6 145 aa29.39■■■□□ 2.3
U2AF1-206ENST00000464750 APBB2Q92870 758 aa29.39■■■□□ 2.3
U2AF1-206ENST00000464750 ZNF577Q9BSK1 485 aa29.39■■■□□ 2.3
U2AF1-206ENST00000464750 IFIH1Q9BYX4 1025 aaKnown RBP29.39■■■□□ 2.3
U2AF1-206ENST00000464750 WDR81Q562E7 1941 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 LOXHD1Q8IVV2 1947 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 BACH1O14867 736 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 DHX15O43143 795 aaKnown RBP29.38■■■□□ 2.29
U2AF1-206ENST00000464750 GHRP10912 638 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 NLRP5P59047 1200 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 ABHD15Q6UXT9 468 aa29.38■■■□□ 2.29
U2AF1-206ENST00000464750 IGKV6D-21A0A0A0MT36 114 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 DEXIO95424 95 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 SLC26A2P50443 739 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 PRR16Q569H4 304 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 FAM160B1Q5W0V3 765 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 CPLX2Q6PUV4 134 aaKnown RBP29.37■■■□□ 2.29
U2AF1-206ENST00000464750 CCDC60Q8IWA6 550 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-206ENST00000464750 TRAPPC12Q8WVT3 735 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 FAM49AQ9H0Q0 323 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-206ENST00000464750 CDY2AQ9Y6F7 541 aa29.37■■■□□ 2.29
U2AF1-206ENST00000464750 POTEB3A0JP26 581 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 LINC01553A4QN01 128 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 GTPBP6O43824 516 aaPredicted RBP29.36■■■□□ 2.29
U2AF1-206ENST00000464750 CIITAP33076 1130 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 MIS18BP1Q6P0N0 1132 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 POTEBQ6S5H4 581 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 TBC1D22BQ9NU19 505 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 VCANP13611 3396 aa29.36■■■□□ 2.29
U2AF1-206ENST00000464750 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.35■■■□□ 2.29
U2AF1-206ENST00000464750 RPLP2P05387 115 aaKnown RBP29.35■■■□□ 2.29
U2AF1-206ENST00000464750 MRPS6P82932 125 aaKnown RBP29.35■■■□□ 2.29
U2AF1-206ENST00000464750 LPIN1Q14693 890 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 ZNF302Q9NR11 478 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 THEGQ9P2T0 379 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 TCEAL9Q9UHQ7 104 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 INSL6Q9Y581 213 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 MTCH2Q9Y6C9 303 aa29.35■■■□□ 2.29
U2AF1-206ENST00000464750 POU3F3P20264 500 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms