RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KCTD19Q17RG1 926 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 CASC4Q6P4E1 433 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 CLEC4GQ6UXB4 293 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ZNF354CQ86Y25 554 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 RAD54LQ92698 747 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 CCDC17Q96LX7 622 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 AGXT2Q9BYV1 514 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 TDRD3Q9H7E2 651 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 SNX12Q9UMY4 172 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 BZW2Q9Y6E2 419 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 TCHHQ07283 1943 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 DYNLT1P63172 113 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ITPK1Q13572 414 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 QRICH1Q2TAL8 776 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 TXNRD3Q86VQ6 643 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 GLG1Q92896 1179 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 C1orf167Q5SNV9 1468 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 A0A087X0B3 334 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ANO9A1A5B4 782 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 H3BQF6 201 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 DAPK3O43293 454 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 FOSP01100 380 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 ATP2A2P16615 1042 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 LMNB1P20700 586 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 MAGOHP61326 146 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 ARHGAP4P98171 946 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 SGO2Q562F6 1265 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 TADA2BQ86TJ2 420 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 MCUR1Q96AQ8 359 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ELAC2Q9BQ52 826 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 HEMGNQ9BXL5 484 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 RBM12Q9NTZ6 932 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 WDR91A4D1P6 747 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 NR3C1P04150 777 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ALDH1B1P30837 517 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 MXI1P50539 228 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ACTN3Q08043 901 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 EZH2Q15910 746 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 CCDC38Q502W7 563 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 ARHGEF16Q5VV41 709 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 TRIM65Q6PJ69 517 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 GUF1Q8N442 669 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 CCDC89Q8N998 374 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 STMN2Q93045 179 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 HAUS1Q96CS2 278 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 PLCB1Q9NQ66 1216 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 KLHL14Q9P2G3 628 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 GGT7Q9UJ14 662 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 MRPL11Q9Y3B7 192 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 EIF4E1BA6NMX2 242 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 GOLGA8SH3BPF8 625 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ZBTB5O15062 677 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ORC4O43929 436 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ARL1P40616 181 aaPredicted RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 NSFP46459 744 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 CARSP49589 748 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 HDLBPQ00341 1268 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 DR1Q01658 176 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 TBC1D1Q86TI0 1168 aaPredicted RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 CCDC197Q8NCU1 140 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 DEPTORQ8TB45 409 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 TMOD4Q9NZQ9 345 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 DMGDHQ9UI17 866 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 NOP56O00567 594 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 SRGNP10124 158 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ATF2P15336 505 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 BMP6P22004 513 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 MAPK4P31152 587 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 PEX3P56589 373 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 VPS52Q8N1B4 723 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 NT5C1BQ96P26 610 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 CCSER1Q9C0I3 900 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 SH3GLB2Q9NR46 395 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 CEP72Q9P209 647 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 SCAF8Q9UPN6 1271 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 TTLL3Q9Y4R7 772 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 A0A1W2PQC6 194 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 BBOX1O75936 387 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 CAMTA2O94983 1202 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 SEC24CP53992 1094 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 PMS1P54277 932 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 ANKRD20A3Q5VUR7 823 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ALS2CLQ60I27 953 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 TMED8Q6PL24 325 aaPredicted RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 EEPD1Q7L9B9 569 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
HPS4-208ENST00000464362 NEURL4Q96JN8 1562 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 NARFQ9UHQ1 456 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 COMMD10Q9Y6G5 202 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 CAPN6Q9Y6Q1 641 aa9.84□□□□□ -0.83
HPS4-208ENST00000464362 PVALEFA0A1B0GWK0 134 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 ZBED4O75132 1171 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms