RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DDNO94850 711 aaPredicted RBP24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 COG2Q14746 738 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 RAD9BQ6WBX8 426 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 IQCDQ96DY2 449 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 RUSC1Q9BVN2 902 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 KCTD10Q9H3F6 313 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 RNF146Q9NTX7 359 aa24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 LUC7L2Q9Y383 392 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-216ENST00000464275 TRAF5O00463 557 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 TBCAO75347 108 aaKnown RBP24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 USP2O75604 605 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 CCDC175P0C221 793 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 GAP43P17677 238 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 MRPS9P82933 396 aaKnown RBP24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 CBX1P83916 185 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 PGM5Q15124 567 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 CYP26C1Q6V0L0 522 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 CATSPERGQ6ZRH7 1159 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 SFR1Q86XK3 245 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 PIGOQ8TEQ8 1089 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 WNK4Q96J92 1243 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 AFG3L2Q9Y4W6 797 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 COL4A3BPQ9Y5P4 624 aa24.04■■□□□ 1.44
PDLIM2-216ENST00000464275 MTF1Q14872 753 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 NELFCDQ8IXH7 590 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 OR8K1Q8NGG5 319 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 NDST4Q9H3R1 872 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 AGO4Q9HCK5 861 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 GNA14O95837 355 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 EIF2AK2P19525 551 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 EDRF1Q3B7T1 1238 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 FIGNQ5HY92 759 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 NSMFQ6X4W1 530 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 EPM2AIP1Q7L775 607 aaPredicted RBP24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 MIER3Q7Z3K6 550 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 ZC3H3Q8IXZ2 948 aaKnown RBP24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 TTYH3Q9C0H2 523 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 PXMP2Q9NR77 195 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 RNF181Q9P0P0 153 aa24.03■■□□□ 1.44
PDLIM2-216ENST00000464275 SH3D19Q5HYK7 790 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 TRIM65Q6PJ69 517 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 C1orf186Q6ZWK4 172 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 RMDN3Q96TC7 470 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 DNAJC7Q99615 494 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 KCND2Q9NZV8 630 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 DNAI1Q9UI46 699 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 ADGRG1Q9Y653 693 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 MYPNQ86TC9 1320 aa24.02■■□□□ 1.44
PDLIM2-216ENST00000464275 ATP2A1O14983 1001 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 DHX15O43143 795 aaKnown RBP24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 ERVK-24P63145 666 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 TSR1Q2NL82 804 aaKnown RBP24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 SNRNP48Q6IEG0 339 aaKnown RBP24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 XRRA1Q6P2D8 792 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 PCMTD1Q96MG8 357 aaPredicted RBP24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 PDCD2LQ9BRP1 358 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 DESI2Q9BSY9 194 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 RIPK3Q9Y572 518 aa24.02■■□□□ 1.43
PDLIM2-216ENST00000464275 RSPH10B2B2RC85 870 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 RSPH10BP0C881 870 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 TRIM21P19474 475 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 MAP3K9P80192 1104 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 DMTNQ08495 405 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 MTMR1Q13613 665 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 NAA30Q147X3 362 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 CCDC40Q4G0X9 1142 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 ARHGEF16Q5VV41 709 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 RBM46Q8TBY0 533 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 DCPSQ96C86 337 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 LXNQ9BS40 222 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 OLFML3Q9NRN5 406 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 TBC1D22BQ9NU19 505 aa24.01■■□□□ 1.43
PDLIM2-216ENST00000464275 A0A1W2PQJ5 194 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 DDX39AO00148 427 aaKnown RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 NKRFO15226 690 aaKnown RBP eCLIP24■■□□□ 1.43
PDLIM2-216ENST00000464275 FAM13AO94988 1023 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 ZSCAN20P17040 1043 aaPredicted RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 PRKG1Q13976 671 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 ELF2Q15723 593 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 BMT2Q1RMZ1 405 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 ILDR2Q71H61 639 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 MAF1Q9H063 256 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 HOXC10Q9NYD6 342 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 ZNF214Q9UL59 606 aaPredicted RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 TRAF3IP3Q9Y228 551 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 LCTP09848 1927 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 RASSF10A6NK89 507 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 MYCLP12524 364 aaPredicted RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 CASP5P51878 434 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 BAATQ14032 418 aaPredicted RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 KNOP1Q1ED39 458 aaKnown RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 MRPL44Q9H9J2 332 aaKnown RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 PKD2L1Q9P0L9 805 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 WRAP73Q9P2S5 460 aaPredicted RBP24■■□□□ 1.43
PDLIM2-216ENST00000464275 SNCAIPQ9Y6H5 919 aa24■■□□□ 1.43
PDLIM2-216ENST00000464275 P4HBP07237 508 aaKnown RBP23.99■■□□□ 1.43
PDLIM2-216ENST00000464275 ZBED6P86452 979 aa23.99■■□□□ 1.43
PDLIM2-216ENST00000464275 ITGB3BPQ13352 177 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-216ENST00000464275 CETN3O15182 167 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms