RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 MARK3P27448 753 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 JAK3P52333 1124 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 PTPN11Q06124 597 aaPredicted RBP21.34■■□□□ 1.01
LMNB1-204ENST00000463908 IL17AQ16552 155 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 FAM47CQ5HY64 1035 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 FOXD4L5Q5VV16 416 aaPredicted RBP21.34■■□□□ 1.01
LMNB1-204ENST00000463908 MIER3Q7Z3K6 550 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 FOXD4L4Q8WXT5 416 aaPredicted RBP21.34■■□□□ 1.01
LMNB1-204ENST00000463908 ZSCAN16Q9H4T2 348 aaPredicted RBP21.34■■□□□ 1.01
LMNB1-204ENST00000463908 AZI2Q9H6S1 392 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 ZNF302Q9NR11 478 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 TRMT13Q9NUP7 481 aaKnown RBP21.34■■□□□ 1.01
LMNB1-204ENST00000463908 ERAP1Q9NZ08 941 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 GABBR1Q9UBS5 961 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 ZDHHC9Q9Y397 364 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 SAMM50Q9Y512 469 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 DNAH12Q6ZR08 3092 aa21.34■■□□□ 1.01
LMNB1-204ENST00000463908 BACH1O14867 736 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 B4GALT4O60513 344 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 SMIM10L2AP0DMW4 78 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 SMIM10L2BP0DMW5 78 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 ZSCAN22P10073 491 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-204ENST00000463908 ZNF200P98182 395 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-204ENST00000463908 PLCB4Q15147 1175 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 GDF6Q6KF10 455 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-204ENST00000463908 SH3RF1Q7Z6J0 888 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 C7orf61Q8IZ16 206 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 C7orf31Q8N865 590 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 RDM1Q8NG50 284 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 CTAGE1Q96RT6 745 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 GTF2IRD1Q9UHL9 959 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 TCEAL9Q9UHQ7 104 aa21.33■■□□□ 1.01
LMNB1-204ENST00000463908 ZNF215Q9UL58 517 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-204ENST00000463908 DCDC2CA8MYV0 355 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 ZNF862O60290 1169 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 HOXC8P31273 242 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 TECP42680 631 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 EPHA7Q15375 998 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 UGCGQ16739 394 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 FAM160B1Q5W0V3 765 aa21.32■■□□□ 1
LMNB1-204ENST00000463908 MROH7Q68CQ1 1323 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 RANBP2P49792 3224 aaKnown RBP21.31■■□□□ 1
LMNB1-204ENST00000463908 TRIM43BA6NCK2 446 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 STBD1O95210 358 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 ATP2C1P98194 919 aaPredicted RBP21.31■■□□□ 1
LMNB1-204ENST00000463908 NCAPH2Q6IBW4 605 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 PDXDC2PQ6P474 469 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 TRIM43Q96BQ3 446 aaPredicted RBP21.31■■□□□ 1
LMNB1-204ENST00000463908 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 1
LMNB1-204ENST00000463908 SETD4Q9NVD3 440 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 CLIC4Q9Y696 253 aa21.31■■□□□ 1
LMNB1-204ENST00000463908 IGSF9BQ9UPX0 1349 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 BRD1O95696 1058 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 F13A1P00488 732 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 CLTBP09497 229 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 INSRRP14616 1297 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 DDIT3P35638 169 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 SLC26A2P50443 739 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 ADAM17P78536 824 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 SF3A1Q15459 793 aaKnown RBP21.3■■□□□ 1
LMNB1-204ENST00000463908 BANK1Q8NDB2 785 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 HSD17B14Q9BPX1 270 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 PDLIM7Q9NR12 457 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 RGL1Q9NZL6 768 aa21.3■■□□□ 1
LMNB1-204ENST00000463908 POTEB3A0JP26 581 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 POTEMA6NI47 508 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 LAD1O00515 517 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 SLITRK3O94933 977 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 ITGB8P26012 769 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 PRPHP41219 470 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 FXR2P51116 673 aaKnown RBP eCLIP21.29■■□□□ 13e-6■■□□□ 13.6
LMNB1-204ENST00000463908 PTPAQ15257 358 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 PTGISQ16647 500 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 MARCH8Q5T0T0 291 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 POTEBQ6S5H4 581 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 ATP8B4Q8TF62 1192 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 WRAP73Q9P2S5 460 aaPredicted RBP21.29■■□□□ 1
LMNB1-204ENST00000463908 TBX21Q9UL17 535 aa21.29■■□□□ 1
LMNB1-204ENST00000463908 COLQQ9Y215 455 aaPredicted RBP21.29■■□□□ 1
LMNB1-204ENST00000463908 C17orf102A2RUQ5 167 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 KIAA0355O15063 1070 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
LMNB1-204ENST00000463908 TREHO43280 583 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 P4HBP07237 508 aaKnown RBP21.28■■□□□ 1
LMNB1-204ENST00000463908 CYP2C9P11712 490 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 SYN1P17600 705 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 PDIA5Q14554 519 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 TRMT1LQ7Z2T5 733 aaKnown RBP21.28■■□□□ 1
LMNB1-204ENST00000463908 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 DYDC2Q96IM9 177 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 USP28Q96RU2 1077 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 EIF2AK1Q9BQI3 630 aaKnown RBP21.28■■□□□ 1
LMNB1-204ENST00000463908 TMEM39AQ9NV64 488 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 ZMYND8Q9ULU4 1186 aaPredicted RBP21.28■■□□□ 1
LMNB1-204ENST00000463908 NR2E3Q9Y5X4 410 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 NRCAMQ92823 1304 aa21.28■■□□□ 1
LMNB1-204ENST00000463908 ZBTB42B2RXF5 422 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 HBP1O60381 514 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 QARSP47897 775 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms