RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PDE1AP54750 535 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PLOD1Q02809 727 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GUCY2DQ02846 1103 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ITGA7Q13683 1181 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 POSTNQ15063 836 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SLC44A4Q53GD3 710 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ZMYM1Q5SVZ6 1142 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 C6orf183Q5T699 404 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GKAP1Q5VSY0 366 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 MAATS1Q7Z4T9 603 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 UBE2Q1Q7Z7E8 422 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CPLX4Q7Z7G2 160 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SLC43A3Q8NBI5 491 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CNKSR1Q969H4 720 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SEC16BQ96JE7 1060 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TCEANC2Q96MN5 208 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 HTATIP2Q9BUP3 242 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CARD9Q9H257 536 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TAF1DQ9H5J8 278 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PHAXQ9H814 394 aaKnown RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 AASDHPPTQ9NRN7 309 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 LRRC4BQ9NT99 713 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PRELID1Q9Y255 219 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SH3TC1Q8TE82 1336 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GPR75-ASB3A0A0A6YYF3 556 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TMEM247A6NEH6 219 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PDLIM1O00151 329 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 HGSO14964 777 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TIMM44O43615 452 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 RAD21O60216 631 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 USO1O60763 962 aaKnown RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 FLOT1O75955 427 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SP100P23497 879 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CCNFP41002 786 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TRPC1P48995 793 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TUBB4BP68371 445 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 FXNQ16595 210 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CTC1Q2NKJ3 1217 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ALS2CLQ60I27 953 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GRAMD4Q6IC98 578 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 C6orf89Q6UWU4 347 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 CRELD2Q6UXH1 353 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 FAM47EQ6ZV65 393 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TMEM139Q8IV31 216 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 VSTM4Q8IW00 320 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SIX5Q8N196 739 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 KIF2BQ8N4N8 673 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TEX9Q8N6V9 391 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF713Q8N859 430 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 TTC14Q96N46 770 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GBP5Q96PP8 586 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 MMS19Q96T76 1030 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SIKE1Q9BRV8 207 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PCDH18Q9HCL0 1135 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PLCB1Q9NQ66 1216 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 PFDN4Q9NQP4 134 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 GGT7Q9UJ14 662 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 LEMD3Q9Y2U8 911 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 DAAM1Q9Y4D1 1078 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 ASB3Q9Y575 518 aa3.95□□□□□ -1.78
COL8A1-205ENST00000463753 COL11A1P12107 1806 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-205ENST00000463753 SMIM23A6NLE4 172 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 A6NNZ2 444 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 BOLA2-SMG1P6H3BVE0 249 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 IKBKBO14920 756 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 LZTS3O60299 673 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 STX10O60499 249 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 DNAJC8O75937 253 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SPATA31D3P0C874 917 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PRKAR2BP31323 418 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 MDH1P40925 334 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 AMPHP49418 695 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SARSP49591 514 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PSMD7P51665 324 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 USP11P51784 963 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 KCNJ2P63252 427 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 MCL1Q07820 350 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 C2orf54Q08AI8 447 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SEPT7Q16181 437 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TUBB8Q3ZCM7 444 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ODF2Q5BJF6 829 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 NAA16Q6N069 864 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SPATA31D4Q6ZUB0 917 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TTC30BQ8N4P2 665 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TSEN2Q8NCE0 465 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ATXN2LQ8WWM7 1075 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF653Q96CK0 615 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 BPIFA3Q9BQP9 254 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 POLR3CQ9BUI4 534 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PDGFDQ9GZP0 370 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 VCXQ9H320 206 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 VCX3BQ9H321 246 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 VCX3AQ9NNX9 186 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms