RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 MARCH8Q5T0T0 291 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 EP400NLQ6ZTU2 488 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 CRIPAKQ8N1N5 446 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 SEPT1Q8WYJ6 367 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 P2RX5Q93086 422 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 POP1Q99575 1024 aaKnown RBP19.87■□□□□ 0.77
HMGN1-209ENST00000463631 UPF3BQ9BZI7 483 aaKnown RBP19.87■□□□□ 0.77
HMGN1-209ENST00000463631 SQORQ9Y6N5 450 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 WDFY4Q6ZS81 3184 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 SGSM2O43147 1006 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 TBX10O75333 385 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 DGKIO75912 1065 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 IRS1P35568 1242 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 SMAD4Q13485 552 aaKnown RBP19.86■□□□□ 0.77
HMGN1-209ENST00000463631 BTG3Q14201 252 aaPredicted RBP19.86■□□□□ 0.77
HMGN1-209ENST00000463631 LINC01599Q8WXQ3 324 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 UIMC1Q96RL1 719 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 SMARCAD1Q9H4L7 1026 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 UBIAD1Q9Y5Z9 338 aa19.86■□□□□ 0.77
HMGN1-209ENST00000463631 MAFGO15525 162 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 MBTPS2O43462 519 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 GNAQP50148 359 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 MRPS6P82932 125 aaKnown RBP19.85■□□□□ 0.77
HMGN1-209ENST00000463631 DLX2Q07687 328 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-209ENST00000463631 MTMR1Q13613 665 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 CAMK1Q14012 370 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 CMTR2Q8IYT2 770 aaKnown RBP19.85■□□□□ 0.77
HMGN1-209ENST00000463631 DNAJB3Q8WWF6 145 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 GLG1Q92896 1179 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 MAP4K1Q92918 833 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 MYL10Q9BUA6 226 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 FTHL17Q9BXU8 183 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 PSTPIP2Q9H939 334 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 CDY2AQ9Y6F7 541 aa19.85■□□□□ 0.77
HMGN1-209ENST00000463631 RRN3P2A6NIE6 340 aa19.84■□□□□ 0.77
HMGN1-209ENST00000463631 MARK3P27448 753 aa19.84■□□□□ 0.77
HMGN1-209ENST00000463631 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
HMGN1-209ENST00000463631 HERC4Q5GLZ8 1057 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-209ENST00000463631 AGO3Q9H9G7 860 aaKnown RBP19.84■□□□□ 0.77
HMGN1-209ENST00000463631 PLAGL2Q9UPG8 496 aa19.84■□□□□ 0.77
HMGN1-209ENST00000463631 TECTAO75443 2155 aa19.84■□□□□ 0.77
HMGN1-209ENST00000463631 PLEKHA8P1O95397 391 aa19.83■□□□□ 0.77
HMGN1-209ENST00000463631 FAM43BQ6ZT52 329 aaPredicted RBP19.83■□□□□ 0.77
HMGN1-209ENST00000463631 SRBD1Q8N5C6 995 aaKnown RBP19.83■□□□□ 0.77
HMGN1-209ENST00000463631 PPP2R3CQ969Q6 453 aa19.83■□□□□ 0.77
HMGN1-209ENST00000463631 MRPL42Q9Y6G3 142 aaKnown RBP19.83■□□□□ 0.77
HMGN1-209ENST00000463631 LOXHD1Q8IVV2 1947 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 IGSF9BQ9UPX0 1349 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 SPDYE3A6NKU9 549 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 CD52P31358 61 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 ADAM15Q13444 863 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 IER5Q5VY09 327 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 ALYREFQ86V81 257 aaKnown RBP19.82■□□□□ 0.76
HMGN1-209ENST00000463631 NPAS4Q8IUM7 802 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 TEX2Q8IWB9 1127 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 TMTC2Q8N394 836 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 PCYT2Q99447 389 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 JPH1Q9HDC5 661 aaPredicted RBP19.82■□□□□ 0.76
HMGN1-209ENST00000463631 JADE2Q9NQC1 790 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 CD207Q9UJ71 328 aa19.82■□□□□ 0.76
HMGN1-209ENST00000463631 ZDBF2Q9HCK1 2354 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 KDM3AQ9Y4C1 1321 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 SH2B2O14492 632 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-209ENST00000463631 PRC1O43663 620 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 EYA4O95677 639 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 CALM1P0DP23 149 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 CALM2P0DP24 149 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 CALM3P0DP25 149 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 INSRRP14616 1297 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 NHLH1Q02575 133 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 CLUL1Q15846 466 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 HFE2Q6ZVN8 426 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 TNPO1Q92973 898 aaKnown RBP19.81■□□□□ 0.76
HMGN1-209ENST00000463631 TMEM87BQ96K49 555 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 MSLNLQ96KJ4 702 aa19.81■□□□□ 0.76
HMGN1-209ENST00000463631 FAM49AQ9H0Q0 323 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-209ENST00000463631 ALG13Q9NP73 1137 aaKnown RBP19.81■□□□□ 0.76
HMGN1-209ENST00000463631 RBM8AQ9Y5S9 174 aaKnown RBP19.81■□□□□ 0.76
HMGN1-209ENST00000463631 LINC01565O15544 149 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 ITGB1P05556 798 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 MCM5P33992 734 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 GTF2F1P35269 517 aaKnown RBP eCLIP19.8■□□□□ 0.76
HMGN1-209ENST00000463631 LIFRP42702 1097 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 UBE2SQ16763 222 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 RTN4RL1Q86UN2 441 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-209ENST00000463631 EFHBQ8N7U6 833 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 FBXL18Q96ME1 805 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 AZI2Q9H6S1 392 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 KCNH7Q9NS40 1196 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 PKD2L1Q9P0L9 805 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 SLC9A2Q9UBY0 812 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 MUTYHQ9UIF7 546 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 PCDHA2Q9Y5H9 948 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 TRPV2Q9Y5S1 764 aa19.8■□□□□ 0.76
HMGN1-209ENST00000463631 NFASCO94856 1347 aa19.79■□□□□ 0.76
HMGN1-209ENST00000463631 CCDC69A6NI79 296 aa19.79■□□□□ 0.76
HMGN1-209ENST00000463631 M0QZ92 97 aa19.79■□□□□ 0.76
HMGN1-209ENST00000463631 STAG3L1P0CL83 205 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms